Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04917 and BPUM_2956

See DNA alignment / Visit BSNT_04917 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:38
# Commandline: needle
#    -asequence pep-align/BSNT_04917___yuxN.1.24716.seq
#    -bsequence pep-align/BPUM_2956.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04917___yuxN-BPUM_2956.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04917___yuxN-BPUM_2956.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04917___yuxN
# 2: BPUM_2956
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 292
# Identity:     148/292 (50.7%)
# Similarity:   208/292 (71.2%)
# Gaps:           1/292 ( 0.3%)
# Score: 768.0
# 
#
#=======================================

BSNT_04917___      1 MKEKEKLIIETALKLFAQKGYNSTSVQEIAKECKISKGAFYIYFPSKEAL     50
                     ||:|||:|||..:||||.||||:|||||||.||.:||||||:||.|||||
BPUM_2956          1 MKKKEKMIIEAGMKLFASKGYNTTSVQEIADECHMSKGAFYLYFKSKEAL     50

BSNT_04917___     51 LLSMLNYYYDKTFTRILNIKTKGDSPRTAYRKQLTVLYENILEHKDFISM    100
                     |:|:|:|||||.||||..::|:|.:|:.||||||||.|:|||:.||||.|
BPUM_2956         51 LISILHYYYDKVFTRIHEVQTEGGTPKEAYRKQLTVYYDNILQQKDFIKM    100

BSNT_04917___    101 QLKEGSLPYTEEVEQCAKKIRQSSLQFHIDSLLNIYGKKAEPYTAELCFL    150
                     ||.:.:||..||.:|.||:||.:::|.|||::..:||..|.||.|:||..
BPUM_2956        101 QLSDRALPMNEETQQLAKQIRLATVQLHIDNIKQVYGDVAIPYIADLCLT    150

BSNT_04917___    151 IEGISQIYLECMILLGYTVKPSQLADIIMNRIDDMVKGMSERNDKPFITL    200
                     |||:|.:|.|..||..:.::..:||..:::||||::.||.||.|.|.|::
BPUM_2956        151 IEGMSHVYFELAILYDFQLEAEELAATMIHRIDDLMGGMMEREDLPLISV    200

BSNT_04917___    201 EEASSLFGPLTHGRPDPLTESIVKSLRDKINS-LNTNSSLELSESLDILE    249
                     ::||..|||:.....||||||::|.||::..: .......:|.|:|.|||
BPUM_2956        201 DQASDWFGPIYERSFDPLTESLLKELREQAEAHYEVKDEPDLFEALGILE    250

BSNT_04917___    250 AEMKKKTPKLAIIKGMIHNLTESEALAKDAEQLKYLLKQQHI    291
                     .|:.|:.|:..|:|||::.|.....|...:|.|..:||:.|:
BPUM_2956        251 NELNKQKPRQVIVKGMLYQLKLYTPLQTHSESLLRILKEDHL    292


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