Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04874 and BPUM_2945

See DNA alignment / Visit BSNT_04874 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:37
# Commandline: needle
#    -asequence pep-align/BSNT_04874___yusN.1.24716.seq
#    -bsequence pep-align/BPUM_2945.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04874___yusN-BPUM_2945.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04874___yusN-BPUM_2945.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04874___yusN
# 2: BPUM_2945
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 115
# Identity:      81/115 (70.4%)
# Similarity:    93/115 (80.9%)
# Gaps:           5/115 ( 4.3%)
# Score: 419.0
# 
#
#=======================================

BSNT_04874___      1 MNQQN-QKISNPQTPVPTTSEMNDRDFVNELLTTEKYMTTAYCTALHEFS     49
                     |.||| |||.|||||||||:.|||||||.:||:||||||:.|.|||:|||
BPUM_2945          1 MEQQNQQKIGNPQTPVPTTTNMNDRDFVTDLLSTEKYMTSGYNTALNEFS     50

BSNT_04874___     50 HESLYQDIQSIFDESQKAQRKLYDLMFQYGWYSVEAEDAQKLQQSYQKFQ     99
                     |||||||||.|..|:||.||.|||:||:||||||||.:.|||||::||||
BPUM_2945         51 HESLYQDIQRIALETQKTQRHLYDVMFRYGWYSVEAAEEQKLQQAHQKFQ    100

BSNT_04874___    100 QTIQQQSPYQQ----    110
                     ||:..||||..    
BPUM_2945        101 QTLTDQSPYGPSQMS    115


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