Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04873 and BPUM_2944

See DNA alignment / Visit BSNT_04873 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:37
# Commandline: needle
#    -asequence pep-align/BSNT_04873.1.24716.seq
#    -bsequence pep-align/BPUM_2944.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04873-BPUM_2944.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04873-BPUM_2944.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04873
# 2: BPUM_2944
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 83
# Identity:      57/83 (68.7%)
# Similarity:    68/83 (81.9%)
# Gaps:           3/83 ( 3.6%)
# Score: 294.0
# 
#
#=======================================

BSNT_04873         1 MDNQQQSQMPPSVISTKDHLYLNDMLNWNLLAMKKAHFMAQQCQDQTLKQ     50
                     |:|||.: |||.|||.||.|||.|||||||:|||||||||:.||||||||
BPUM_2944          1 MNNQQMN-MPPQVISVKDSLYLEDMLNWNLIAMKKAHFMAEHCQDQTLKQ     49

BSNT_04873        51 ELDRIGHMHHDHYQRILKHL-QPGQQQS-GYIQ     81
                     ||:::|.|||.||.:||:|| ..||.|| |::|
BPUM_2944         50 ELNQVGQMHHQHYTQILQHLGSSGQGQSTGFMQ     82


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.