Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04861 and BPUM_2937

See DNA alignment / Visit BSNT_04861 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:35
# Commandline: needle
#    -asequence pep-align/BSNT_04861___yusG.1.24716.seq
#    -bsequence pep-align/BPUM_2937.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04861___yusG-BPUM_2937.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04861___yusG-BPUM_2937.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04861___yusG
# 2: BPUM_2937
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 81
# Identity:      40/81 (49.4%)
# Similarity:    56/81 (69.1%)
# Gaps:           3/81 ( 3.7%)
# Score: 240.0
# 
#
#=======================================

BSNT_04861___      1 ---MAFDKQKLDVTNDVTGRFQNGRLSLYHDNEMIGQMTSMNEYELKPGY     47
                        ::|.|:::|:|:.|||||:...:.|||.||.||.|.|.|:||||.||
BPUM_2937          1 MSNLSFQKEQVDITDHVTGRFKESGMVLYHQNEEIGTMISENQYELKSGY     50

BSNT_04861___     48 SFENEKFYKTADVVSGDDAKYVDCDYENGWC     78
                     |::..:||:..|.::....||||||.|||||
BPUM_2937         51 SYDQNRFYRLTDTLTHGTEKYVDCDDENGWC     81


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