Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04859 and BPUM_2935

See DNA alignment / Visit BSNT_04859 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:35
# Commandline: needle
#    -asequence pep-align/BSNT_04859___yusE.1.24716.seq
#    -bsequence pep-align/BPUM_2935.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04859___yusE-BPUM_2935.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04859___yusE-BPUM_2935.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04859___yusE
# 2: BPUM_2935
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 106
# Identity:      68/106 (64.2%)
# Similarity:    85/106 (80.2%)
# Gaps:           6/106 ( 5.7%)
# Score: 386.0
# 
#
#=======================================

BSNT_04859___      1 MKELQEHELDHIEDDVYLLYLYTPFCGTCQLASKMLTVVKEMLPDVAFYQ     50
                     |||::||:...|:||::|||||||||||||||.|||.||..|.|||.||:
BPUM_2935          1 MKEIEEHDFKEIKDDLFLLYLYTPFCGTCQLAKKMLAVVDTMQPDVPFYE     50

BSNT_04859___     51 NNVNYSPTFAKAYQIESVPCFLLFKGGKVVERGYAFHSVSYLYELIKQKS    100
                     ||:||||.||||::|||||||||||.|::|::|||||||.||:|:|:...
BPUM_2935         51 NNLNYSPGFAKAFEIESVPCFLLFKKGELVQKGYAFHSVPYLHEMIETAK    100

BSNT_04859___    101 SSASHL    106
                           
BPUM_2935        100 ------    100


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