Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04858 and BPUM_2934

See DNA alignment / Visit BSNT_04858 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:35
# Commandline: needle
#    -asequence pep-align/BSNT_04858___yusD.1.24716.seq
#    -bsequence pep-align/BPUM_2934.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04858___yusD-BPUM_2934.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04858___yusD-BPUM_2934.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04858___yusD
# 2: BPUM_2934
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 114
# Identity:      60/114 (52.6%)
# Similarity:    87/114 (76.3%)
# Gaps:           1/114 ( 0.9%)
# Score: 312.0
# 
#
#=======================================

BSNT_04858___      1 MEKAEVLEDEYQHLFLKPLLNASTLLITFQGEAEALTVSINEQGEMKKVS     50
                     |||.:...::.|.|.|||||::|:|.|||:.|.::.|:.::|:||:||:.
BPUM_2934          1 MEKVKTHGNKGQRLLLKPLLSSSSLKITFEAETDSCTLIVDERGEVKKLP     50

BSNT_04858___     51 PPQTSNLTFYGNQTEIIDLLHGDISLQHLIQSGSLKVKGSFRALLKLEAI    100
                     ..:.|:|.|||.:.||:.||.||:|||.||..|.:||||||||||:|||:
BPUM_2934         51 AIELSDLIFYGERKEILQLLDGDMSLQQLISRGQVKVKGSFRALLRLEAV    100

BSNT_04858___    101 LWLTNGFFQRVLKN    114
                     ||||||||::::. 
BPUM_2934        101 LWLTNGFFRKMIT-    113


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