Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04855 and BPUM_2932
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:35
# Commandline: needle
# -asequence pep-align/BSNT_04855___yusC.1.24716.seq
# -bsequence pep-align/BPUM_2932.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04855___yusC-BPUM_2932.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04855___yusC-BPUM_2932.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04855___yusC
# 2: BPUM_2932
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 341
# Identity: 261/341 (76.5%)
# Similarity: 305/341 (89.4%)
# Gaps: 0/341 ( 0.0%)
# Score: 1330.0
#
#
#=======================================
BSNT_04855___ 1 MINLQDVSKVYKSKHGDVNAVQNVSLSIKKGEIFGIIGYSGAGKSSLIRL 50
||:||:|||.|.||.|:|:||::|:|.|.|||||||||||||||||||||
BPUM_2932 1 MIHLQNVSKTYHSKSGNVDAVKDVNLDIGKGEIFGIIGYSGAGKSSLIRL 50
BSNT_04855___ 51 LNGLEKPTSGTVEVAGTKINEVNGRGLRKARHEISMIFQHFNLLWSRTVR 100
|||||.||.|.|||||.:||||:...|||||.||||||||||||||||||
BPUM_2932 51 LNGLELPTEGIVEVAGNRINEVSNAKLRKARQEISMIFQHFNLLWSRTVR 100
BSNT_04855___ 101 DNIMFPLEIAGVKKSERIKRANELIKLVGLEGKEKSYPSQLSGGQKQRVG 150
.|||||||||||..|:|.:|||||||||||||||.:||||||||||||||
BPUM_2932 101 QNIMFPLEIAGVPTSKRRERANELIKLVGLEGKENAYPSQLSGGQKQRVG 150
BSNT_04855___ 151 IARALANNPKVLLCDEATSALDPQTTDSILDLLSDINERLGLTIVLITHE 200
|||||||:|||||||||||||||||||||||||:|||:||||||||||||
BPUM_2932 151 IARALANDPKVLLCDEATSALDPQTTDSILDLLADINKRLGLTIVLITHE 200
BSNT_04855___ 201 MHVIRKICNRVAVMENGKVVEEGEVLDVFKNPKEQMTKRFVQQVTEPEET 250
||||||||:||||||||::|||||||.||:.|||:||||||||:.||||.
BPUM_2932 201 MHVIRKICHRVAVMENGRIVEEGEVLRVFRQPKEEMTKRFVQQLAEPEEA 250
BSNT_04855___ 251 KETLQHLLDDTASGKMVQLTFVGESAEQPLITEMIRNLNVSVNILQGKIS 300
|||::|:|:....|::|:|:|:|:|||||||||:||:..|.|||||||||
BPUM_2932 251 KETIEHVLERVKEGQVVRLSFIGDSAEQPLITEIIRSFKVDVNILQGKIS 300
BSNT_04855___ 301 QTKDGAYGSLFIHIDGDEEEVQNVIRFINDKQVKAEVITNV 341
||::||:|:|||||:|:|.||:..|.:|..|||:.||:|:|
BPUM_2932 301 QTQEGAFGTLFIHINGEETEVEKAIAYIQSKQVEIEVMTHV 341
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