Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04842 and BPUM_2924

See DNA alignment / Visit BSNT_04842 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:34
# Commandline: needle
#    -asequence pep-align/BSNT_04842___yurV.1.24716.seq
#    -bsequence pep-align/BPUM_2924___nifU.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04842___yurV-BPUM_2924___nifU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04842___yurV-BPUM_2924___nifU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04842___yurV
# 2: BPUM_2924___nifU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 148
# Identity:     129/148 (87.2%)
# Similarity:   137/148 (92.6%)
# Gaps:           1/148 ( 0.7%)
# Score: 672.0
# 
#
#=======================================

BSNT_04842___      1 MSFNANLDTLYRQVIMDHYKNPRNKGVLNDSIVVDMNNPTCGDRIRLTMK     50
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BPUM_2924___n      1 MSFNVNLDTLYRQVIMDHYKNPRNKGVLNDSIVVDMNNPTCGDRIRLTMK     50

BSNT_04842___     51 LDGDIVEDAKFEGEGCSISMASASMMTQAIKGKDIETALSMSKIFSDMMQ    100
                     ::.:.|.||||||||||||||||||||||||||||||||.||:||||||.
BPUM_2924___n     51 IEDEKVTDAKFEGEGCSISMASASMMTQAIKGKDIETALKMSQIFSDMML    100

BSNT_04842___    101 GKEYDDSIDLGDIEALQGVSKFPARIKCATLSWKALEKGVAKQEGGN-    147
                     |||||||||||||||||||:|||||||||||||||||||.:.::.|. 
BPUM_2924___n    101 GKEYDDSIDLGDIEALQGVAKFPARIKCATLSWKALEKGASAEDNGKS    148


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