Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04842 and BPUM_2924
See
Amino acid alignment /
Visit
BSNT_04842 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:34
# Commandline: needle
# -asequence dna-align/BSNT_04842___yurV.1.24716.seq
# -bsequence dna-align/BPUM_2924___nifU.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04842___yurV-BPUM_2924___nifU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04842___yurV-BPUM_2924___nifU.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04842___yurV
# 2: BPUM_2924___nifU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 463
# Identity: 354/463 (76.5%)
# Similarity: 354/463 (76.5%)
# Gaps: 35/463 ( 7.6%)
# Score: 1391.5
#
#
#=======================================
BSNT_04842___ 1 ATGTCTTTTAATGCAAACTTAGATACATTGTACAGACAGGTGATTATGGA 50
|||||||||||||.|||||||||.|||.||||||||||.|||||||||||
BPUM_2924___n 1 ATGTCTTTTAATGTAAACTTAGACACACTGTACAGACAAGTGATTATGGA 50
BSNT_04842___ 51 TCATTACAAAAACCCGCGAAATAAAGGGGTTTTGAATGACAGCATTGTCG 100
||||||.|||||.|||.||||.|||||.||.||.||.|||||||||||||
BPUM_2924___n 51 TCATTATAAAAATCCGAGAAACAAAGGTGTGTTAAACGACAGCATTGTCG 100
BSNT_04842___ 101 TGGATATGAACAATCCGACATGCGGCGACCGCATCAGACTGACAATGAAG 150
|.|||||||||||.||.||.||.||.||||||||..|.||.||.|||||.
BPUM_2924___n 101 TCGATATGAACAACCCAACGTGTGGTGACCGCATTCGTCTCACGATGAAA 150
BSNT_04842___ 151 CTTGACGGAGACATCGTGGAA---------GATGCGAAGTTTGAAGGGGA 191
.| ||.|||| ||| ||||||||.||||||||.||
BPUM_2924___n 151 AT---CGAAGAC------GAAAAAGTCACCGATGCGAAATTTGAAGGAGA 191
BSNT_04842___ 192 AGGCTGTTCCATTTCAATGGCATCCGCTTCGATGATGACTCAGGCCATTA 241
|||.||.||.|||||.||||||||.||.||.||||||||.|||||.||||
BPUM_2924___n 192 AGGATGCTCGATTTCGATGGCATCTGCCTCTATGATGACGCAGGCGATTA 241
BSNT_04842___ 242 AAGGGAAAGATATTGAAACTGCCCTTT--CCATGTCTAAGATTTTCTCGG 289
|||||||||||||||||||.| |||| ..||||||.||||||||||.|
BPUM_2924___n 242 AAGGGAAAGATATTGAAACAG--CTTTGAAAATGTCTCAGATTTTCTCCG 289
BSNT_04842___ 290 ATATGATGCAAGGGAAAGAGTATGATGATTCTATAGATCTCGGGGATATT 339
|||||||||.|||.|||||.||.||.|||||.||.|||||.||.||.|||
BPUM_2924___n 290 ATATGATGCTAGGAAAAGAATACGACGATTCCATTGATCTTGGTGACATT 339
BSNT_04842___ 340 GAAGCCCTTCAAGGCGTTTCAAAATTCCCGGCCCGTATCAAATGTGCAAC 389
||.||.||.|||||.||..||||||||||.|||||.||.|||||||||||
BPUM_2924___n 340 GAGGCGCTGCAAGGAGTGGCAAAATTCCCTGCCCGCATTAAATGTGCAAC 389
BSNT_04842___ 390 CCTGTCTTGGAAAGCACTTGAAAAAGGAGTCGCGAAAC-----AAGAAGG 434
..|.||.|||||.||.|||||||||| |||.|.| ||||...
BPUM_2924___n 390 ATTATCATGGAAGGCGCTTGAAAAAG-----GCGCATCTGCCGAAGATAA 434
BSNT_04842___ 435 CGGCAATTAA--- 444
||||||.|.|
BPUM_2924___n 435 CGGCAAATCATAA 447
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.