Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01403 and BPUM_2911

See DNA alignment / Visit BSNT_01403 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:59
# Commandline: needle
#    -asequence pep-align/BSNT_01403___yfiY.1.24716.seq
#    -bsequence pep-align/BPUM_2911.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01403___yfiY-BPUM_2911.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01403___yfiY-BPUM_2911.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01403___yfiY
# 2: BPUM_2911
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 331
# Identity:     152/331 (45.9%)
# Similarity:   206/331 (62.2%)
# Gaps:          20/331 ( 6.0%)
# Score: 663.5
# 
#
#=======================================

BSNT_01403___      1 -MKKHISMLFVFLMAFMVLSAC--NSSESSSNSEGSSSKTRTVKHAMGTS     47
                      .||....|.| :::.::|:||  ||:|..|||:   .|||||:.|:|::
BPUM_2911          1 MFKKSFWSLLV-VLSIVLLAACGSNSNEGKSNSK---EKTRTVESAIGST     46

BSNT_01403___     48 DNIPANPKRIVVLTNEGTEALLALGIKPVGAVKSWKGDPWYDYLKDDMKG     97
                     : |..:|||:|.|....|:|.:|:||||||.|:||...|.|.||:||:|.
BPUM_2911         47 E-IKGSPKRVVTLYQGATDAAVAMGIKPVGVVESWLEAPTYKYLRDDLKD     95

BSNT_01403___     98 VKNVGLETEPNVEAIAELKPDLIIGNKVRQEKIYDQLNAIAPTVFAESLA    147
                     ||.||.||:||:|.|.:|.|||||.:|:|.|:|:|||..|||||..|::.
BPUM_2911         96 VKIVGQETQPNLEEIEKLNPDLIIASKIRHEQIFDQLKEIAPTVATETVF    145

BSNT_01403___    148 GNWKDNLTLYANAVNKADKGKEVIADFDKRVSDLKNKLGDQTNK---TVS    194
                      .:||.:.|..:|:|:.||.||::..:|.||:|.|.|.......   :||
BPUM_2911        146 -TFKDTVKLMGDALNEQDKSKELLTKWDDRVADFKEKAKKDIKNWPMSVS    194

BSNT_01403___    195 VVRFLSGESRIYYTDSFSGIILDQLGFKRPEKQVELFKKQKDQFTFSTDS    244
                     ||.|.:..:|||.| .|:|.||.:|||:.| |.|    |.|.|...:...
BPUM_2911        195 VVNFRADHARIYQT-GFAGSILTELGFEGP-KNV----KDKKQDIITLTD    238

BSNT_01403___    245 KESIPDMDADVLFYFTYKADNAKENEKWANQWTSSSLWKNLKAVKSGNAH    294
                     |||||.|||||::||  ..|..|..||...:|||..|||.|.|||:...|
BPUM_2911        239 KESIPQMDADVIYYF--MDDQDKAVEKAYKEWTSHPLWKQLDAVKAKQVH    286

BSNT_01403___    295 EVDDVVWTTAGGIKAANYLLDDIETYFLKTK    325
                     :||::.|...|||.|||.:||||.......|
BPUM_2911        287 KVDEITWNMGGGIIAANMMLDDIYDRLGIDK    317


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.