Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01406 and BPUM_2910

See DNA alignment / Visit BSNT_01406 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:59
# Commandline: needle
#    -asequence pep-align/BSNT_01406___yfiZ.1.24716.seq
#    -bsequence pep-align/BPUM_2910.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01406___yfiZ-BPUM_2910.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01406___yfiZ-BPUM_2910.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01406___yfiZ
# 2: BPUM_2910
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 338
# Identity:     168/338 (49.7%)
# Similarity:   236/338 (69.8%)
# Gaps:           5/338 ( 1.5%)
# Score: 881.0
# 
#
#=======================================

BSNT_01406___      1 --MICKKASSKWIVLVCLIFILLAAVCASVVYGYTGTSWRQVYQAFTSFN     48
                       .:.||.|||.::....:.::|.....|:..|.|..|.:....||..|:
BPUM_2910          1 MRSLLKKDSSKALLFAGFVVLMLVFFMLSISLGQTSISLKATIHAFLHFD     50

BSNT_01406___     49 GTNEH-VIIKDVRLPRALVATVVGASLAAAGALMQALTKNPLASPGIFGI     97
                     .::.: ||:...||.|||:|||||:|||.:||||||||:||||:|.:.||
BPUM_2910         51 ESDPNSVIVMTSRLSRALIATVVGSSLAISGALMQALTRNPLAAPDLLGI    100

BSNT_01406___     98 NAGAGFFIVAGSFFLHIQSPQALVWSSFLGAAFTAAIVYAAGSLGREGLT    147
                     |||..||||....|...:|....:|::|||||....:|:..||:||:|||
BPUM_2910        101 NAGGLFFIVISIVFFSTESLTGYMWTAFLGAAIAGMLVFLLGSIGRDGLT    150

BSNT_01406___    148 PIKLTLAGAAMAAMFSSLTQGLLSVNELELAQVLFWLTGSVQGRSLDLLM    197
                     |:|:.|||||::|:|:|.|||||.|||..:..:|||:.|||.|||:|:|:
BPUM_2910        151 PVKIVLAGAAISALFASFTQGLLIVNEQSIQSILFWMAGSVSGRSIDMLL    200

BSNT_01406___    198 TMFPYAAAALVICFFLGQKINLLVMGEDVAKGLGQKTGLLKFVMALCVVM    247
                     .:.||...|.|:...||:.||:|:.|:|:||||||:|.:||..|.:.||.
BPUM_2910        201 PVLPYILGATVVALLLGRSINVLLSGDDIAKGLGQRTLMLKITMGVLVVF    250

BSNT_01406___    248 LAGSAVAIAGPISFIGIIIPHFARFVVGNDYRWVLPFSAVLGAILLVCAD    297
                     |||.:||:||.|.|:|.::||..:.:||.|:|||||:.||:||.||:.||
BPUM_2910        251 LAGGSVAVAGSIGFVGFLVPHIVKKLVGPDHRWVLPYCAVVGASLLLVAD    300

BSNT_01406___    298 IGARYIIMPQEVPVGVMTAIIGMPVFVYIARRGAKL--    333
                     :.||::|||||||:|||||:.|.|:|||:.|:|.|.  
BPUM_2910        301 LAARFLIMPQEVPIGVMTAVAGAPLFVYLVRKGLKTGG    338


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