Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01407 and BPUM_2909

See DNA alignment / Visit BSNT_01407 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:59
# Commandline: needle
#    -asequence pep-align/BSNT_01407___yfhA.1.24716.seq
#    -bsequence pep-align/BPUM_2909.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01407___yfhA-BPUM_2909.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01407___yfhA-BPUM_2909.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01407___yfhA
# 2: BPUM_2909
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 356
# Identity:     148/356 (41.6%)
# Similarity:   217/356 (61.0%)
# Gaps:          24/356 ( 6.7%)
# Score: 721.0
# 
#
#=======================================

BSNT_01407___      1 -------------MKLRFGVTAAEKKAWIVFLILLGLTAAVLIISAGLGQ     37
                                  :..:|     .|:.:::.|:|..:...:.|:|..:|.
BPUM_2909          1 MAKTYTVRSKGGRISFQF-----SKRTFLILLLLTAIAFGLFILSLCMGS     45

BSNT_01407___     38 RFIPPWDVAKTFFGAGSKLDELMIMSFRMPRILTALCAGVCLAAAGAILQ     87
                     |||.|.||.....|.|.. :..::.:.|:||.|.|:..|..||.:|.|||
BPUM_2909         46 RFISPMDVLLHLIGQGEG-NTFVLNTLRIPRTLLAVLVGAALAVSGLILQ     94

BSNT_01407___     88 GLVRNPLASPDIIGITGGAAVAVVLLMMFFSDRSSSLTISLSWLPAAAFI    137
                     ||:|||||||||||||.||:...::.::|:..     |:.:::....|..
BPUM_2909         95 GLIRNPLASPDIIGITSGASFGAIMFIVFWMG-----TVPIAYQSLWAIA    139

BSNT_01407___    138 GASAVGLIVYLLAYKNGASTFRLVLIGIGFSMSAQAMTTLLMIKGPIYRA    187
                     ||.||..::|||::|.|.....|||:|||.|...:|..|..::.......
BPUM_2909        140 GAFAVSCLIYLLSWKKGVKPITLVLMGIGISAIMKACVTFTLVLSDTMTT    189

BSNT_01407___    188 SQANVYITGSVYGSNWQHVKIAIILSVILLFICFVALKNMNIQVLGEDIA    237
                     :::.:::|||:|||..:.|...:...:|:|.|..|..:.||::.||:|:|
BPUM_2909        190 TKSYIWLTGSLYGSTMKDVTSMLPWIMIILPIVMVLARTMNVKELGDDLA    239

BSNT_01407___    238 AGAGSAVQRNRFFLLLLSTALTGCAVSVAGTIGFVGLMAPHIARRLVGSS    287
                     .|.|..||..|.|.||:|..|.|.||:.||.|.||||||||:||.::|.|
BPUM_2909        240 TGLGVKVQAKRLFFLLMSVTLAGIAVAFAGGIEFVGLMAPHVARMIIGRS    289

BSNT_01407___    288 YGALLPASALIGALLVLTADIVGRTLFAPVEVPAGVFTAAIGAPYFIYLL    337
                     :.||:|||||:|::||:.||:|.||.|.|::|||||||||||||:|||||
BPUM_2909        290 FIALVPASALVGSILVMLADLVARTAFLPLDVPAGVFTAAIGAPFFIYLL    339

BSNT_01407___    338 YKTRNS    343
                     |:.||.
BPUM_2909        340 YQQRNR    345


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