Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04790 and BPUM_2901
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:33
# Commandline: needle
# -asequence pep-align/BSNT_04790___yunD.1.24716.seq
# -bsequence pep-align/BPUM_2901___ushA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04790___yunD-BPUM_2901___ushA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04790___yunD-BPUM_2901___ushA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04790___yunD
# 2: BPUM_2901___ushA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 469
# Identity: 259/469 (55.2%)
# Similarity: 340/469 (72.5%)
# Gaps: 19/469 ( 4.1%)
# Score: 1389.5
#
#
#=======================================
BSNT_04790___ 1 MKEKLRLYHTNDLHSHFENWLKIVDYIEQKRKEHQSDGEETLVFDIGDHL 50
|.:||.:|||||||||||||.||..||::||:.| ::.|:||||||:
BPUM_2901___u 1 MLQKLWIYHTNDLHSHFENWPKIAAYIKEKRQIH----DQMLLFDIGDHM 46
BSNT_04790___ 51 DRFQFVTEATFGKANVDLLNRLHIDGAAIGNNEGITLPHEELAALYDHAE 100
||...|:||.:||.||.|||:|..||..|||||||||||::|..||:||:
BPUM_2901___u 47 DRVNLVSEADYGKVNVKLLNQLGYDGVTIGNNEGITLPHDQLDQLYEHAQ 96
BSNT_04790___ 101 FPVIVSNLFDKNGNRPSWAVPYHIKSLKNGMSIAFLGVTVPYYPVYDKLG 150
|||::||||:| |.|||||.|||:..::||:.|..||||:.|.|||:|||
BPUM_2901___u 97 FPVVLSNLFEK-GKRPSWAKPYHMIQMENGLKICLLGVTIAYTPVYEKLG 145
BSNT_04790___ 151 WTVTDALESIKETILDVKGQADIIVLLSHLGILDDQAVAEAVPEIDVILE 200
|.:||..:||::.:.:||||||:||||||||||.|:.||...|:||:||.
BPUM_2901___u 146 WEITDPFDSIRDMLQEVKGQADVIVLLSHLGILHDREVARDFPDIDMILG 195
BSNT_04790___ 201 SHTHHLLEDGQVVNGVLLASAEKYGHYVGCVEITVDSVQRSIISKTASVQ 250
||||||||.|::.||||||.|||||||:||||:|:|:..:.:|.|.|:||
BPUM_2901___u 196 SHTHHLLEQGEMDNGVLLACAEKYGHYIGCVELTIDTASKELIEKKATVQ 245
BSNT_04790___ 251 NMAEWTGESAETKAFLNEKEREAEEKLSDAVAELAQDAEVKWFEESELPL 300
::.:...||.|....|.:.||.|:..:.:.|.|:....|.|||:.|.||.
BPUM_2901___u 246 SVDQLISESDEAITTLQQAERRAKALMQEKVTEIESKLETKWFDASPLPQ 295
BSNT_04790___ 301 LLAYALKEWCETDISMVNSGVILGPLKAGPVTKLDLHRICPHPINPVAVR 350
||..|:|:||..||.|:|:|::|..|:||.||:.::||||||||||:.|.
BPUM_2901___u 296 LLTDAIKDWCGADIGMMNAGMVLDSLEAGIVTREEVHRICPHPINPIRVT 345
BSNT_04790___ 351 LTGEELKETIVHAASEQMEQLRIKGLGFRGEVMGKMVYAGV-----EVET 395
|||::|.||:..|..|:||||||||.|||||:||||:|:|: |.||
BPUM_2901___u 346 LTGQQLIETVRRACEEKMEQLRIKGFGFRGELMGKMLYSGLTYTVEEGET 395
BSNT_04790___ 396 KRLDDGITHVTRITLNGEDIKKHKQYSVAVLDMFTLGKLFPLIRDAAEKE 445
||:.|...| .:.|.|...|::..:||:|||.|||.|||....|
BPUM_2901___u 396 KRVKDVFVH-------DQLINKDASYTIGTVDMYTLGSLFPHIRDHEHIE 438
BSNT_04790___ 446 YFMPEFLRDLLAWKLAQ-- 462
|||||||||:|.|:|.:
BPUM_2901___u 439 YFMPEFLRDVLTWRLKEAT 457
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