Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04783 and BPUM_2896

See DNA alignment / Visit BSNT_04783 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:33
# Commandline: needle
#    -asequence pep-align/BSNT_04783___lipA.1.24716.seq
#    -bsequence pep-align/BPUM_2896___lipA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04783___lipA-BPUM_2896___lipA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04783___lipA-BPUM_2896___lipA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04783___lipA
# 2: BPUM_2896___lipA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 298
# Identity:     290/298 (97.3%)
# Similarity:   297/298 (99.7%)
# Gaps:           0/298 ( 0.0%)
# Score: 1521.0
# 
#
#=======================================

BSNT_04783___      1 MAKKDEHLRKPEWLKIKLNTNENYTGLKKLMRENNLHTVCEEAKCPNIHE     50
                     ||||:||:|||:|||||||||||||||||:||||||:|||||||||||||
BPUM_2896___l      1 MAKKEEHVRKPDWLKIKLNTNENYTGLKKMMRENNLNTVCEEAKCPNIHE     50

BSNT_04783___     51 CWAVRRTATFMILGSVCTRACRFCAVKTGLPTELDLQEPERVADSVALMN    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_2896___l     51 CWAVRRTATFMILGSVCTRACRFCAVKTGLPTELDLQEPERVADSVALMN    100

BSNT_04783___    101 LKHAVITAVARDDQKDGGAGIFAETVRAIRRKSPFTTIEVLPSDMGGNYD    150
                     ||||||||||||||||||||:|||||||||||||||||||||||||||||
BPUM_2896___l    101 LKHAVITAVARDDQKDGGAGVFAETVRAIRRKSPFTTIEVLPSDMGGNYD    150

BSNT_04783___    151 NLKTLMDTRPDILNHNIETVRRLTPRVRARATYDRSLEFLRRAKEMQPDI    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_2896___l    151 NLKTLMDTRPDILNHNIETVRRLTPRVRARATYDRSLEFLRRAKEMQPDI    200

BSNT_04783___    201 PTKSSIMIGLGETKEEIIEVMDDLLANNVDIMAIGQYLQPTKKHLKVQKY    250
                     ||||||||||||||||||||||||||||||||||||||||:|||||||||
BPUM_2896___l    201 PTKSSIMIGLGETKEEIIEVMDDLLANNVDIMAIGQYLQPSKKHLKVQKY    250

BSNT_04783___    251 YHPDEFAELKEIAMQKGFSHCEAGPLVRSSYHADEQVNEASKKRQAQA    298
                     ||||||||||||||.|||||||||||||||||||||||||||||||||
BPUM_2896___l    251 YHPDEFAELKEIAMAKGFSHCEAGPLVRSSYHADEQVNEASKKRQAQA    298


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