Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04783 and BPUM_2896
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:33
# Commandline: needle
# -asequence dna-align/BSNT_04783___lipA.1.24716.seq
# -bsequence dna-align/BPUM_2896___lipA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04783___lipA-BPUM_2896___lipA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04783___lipA-BPUM_2896___lipA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04783___lipA
# 2: BPUM_2896___lipA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 897
# Identity: 733/897 (81.7%)
# Similarity: 733/897 (81.7%)
# Gaps: 0/897 ( 0.0%)
# Score: 3009.0
#
#
#=======================================
BSNT_04783___ 1 TTGGCAAAGAAAGACGAACACCTCAGAAAGCCCGAATGGCTTAAAATTAA 50
|||||||||||.||.||.|||.|.|||||.||.||.||||||||||||||
BPUM_2896___l 1 TTGGCAAAGAAGGAAGAGCACGTAAGAAAACCGGACTGGCTTAAAATTAA 50
BSNT_04783___ 51 ATTAAATACAAATGAAAACTATACAGGGCTCAAAAAACTCATGCGGGAAA 100
..|.|||||.||||||||||||||.||..|.||||||.|.||||||||||
BPUM_2896___l 51 GCTGAATACGAATGAAAACTATACCGGTTTGAAAAAAATGATGCGGGAAA 100
BSNT_04783___ 101 ACAACCTGCACACCGTATGCGAAGAAGCAAAGTGCCCGAATATTCATGAA 150
||||||||.|.|||||.||.||.||||||||.||.|||||||||||.|||
BPUM_2896___l 101 ACAACCTGAATACCGTTTGTGAGGAAGCAAAATGTCCGAATATTCACGAA 150
BSNT_04783___ 151 TGCTGGGCGGTCAGACGTACAGCGACATTTATGATTTTAGGTTCTGTTTG 200
||||||||.||.|||.|.||.|||||||||||||||.|.||.||||||||
BPUM_2896___l 151 TGCTGGGCAGTGAGAAGAACCGCGACATTTATGATTCTTGGATCTGTTTG 200
BSNT_04783___ 201 TACAAGAGCATGCCGTTTCTGTGCTGTCAAAACAGGCCTTCCAACTGAGC 250
|||..|.|||||||||||||||||.||.|||||.||.|||||||||||||
BPUM_2896___l 201 TACGCGCGCATGCCGTTTCTGTGCGGTGAAAACTGGACTTCCAACTGAGC 250
BSNT_04783___ 251 TTGACCTGCAAGAGCCGGAACGCGTAGCGGATTCAGTCGCGCTTATGAAT 300
||||||||||||||||.|||||.||.||.||||||||.|||.|.|||||.
BPUM_2896___l 251 TTGACCTGCAAGAGCCAGAACGTGTGGCAGATTCAGTTGCGTTAATGAAC 300
BSNT_04783___ 301 CTGAAACACGCGGTCATTACGGCTGTTGCGCGTGACGATCAGAAAGATGG 350
.|.|||||.||.||.||.||.||.|||||..|.||.||.||.||.|||||
BPUM_2896___l 301 TTAAAACATGCTGTGATAACAGCGGTTGCAAGGGATGACCAAAAGGATGG 350
BSNT_04783___ 351 AGGGGCAGGCATTTTCGCGGAAACTGTCCGTGCGATCCGCAGAAAAAGCC 400
.||.|||||..|.||.||.||||||||.|||||.||..|.||||||||||
BPUM_2896___l 351 CGGAGCAGGTGTGTTTGCTGAAACTGTTCGTGCCATTAGAAGAAAAAGCC 400
BSNT_04783___ 401 CGTTCACAACAATTGAGGTGCTGCCGTCTGATATGGGCGGAAACTACGAT 450
|.||.||.||||||||.||.||.||.||.|||||||||||.||.||||||
BPUM_2896___l 401 CATTTACGACAATTGAAGTTCTCCCTTCAGATATGGGCGGCAATTACGAT 450
BSNT_04783___ 451 AACCTAAAAACCTTAATGGATACACGCCCAGACATCCTGAATCACAATAT 500
|||.|.||.||.||||||||.|||||.||.|||||..|.|||||||||||
BPUM_2896___l 451 AACTTGAAGACGTTAATGGACACACGTCCTGACATTTTAAATCACAATAT 500
BSNT_04783___ 501 CGAAACGGTTCGCCGCCTGACGCCAAGAGTCCGCGCGCGTGCGACGTACG 550
.|||||.|||||..|..|.||||||||.||.||.||||||||.||.||.|
BPUM_2896___l 501 TGAAACCGTTCGTAGATTAACGCCAAGGGTTCGTGCGCGTGCTACATATG 550
BSNT_04783___ 551 ACCGTTCATTGGAATTTTTGCGCCGTGCGAAGGAAATGCAGCCTGACATT 600
|.||||||||.|||||.|||||||||||.||.||||||||||||||||||
BPUM_2896___l 551 ATCGTTCATTAGAATTCTTGCGCCGTGCAAAAGAAATGCAGCCTGACATT 600
BSNT_04783___ 601 CCTACAAAATCAAGTATCATGATCGGACTCGGCGAAACAAAAGAAGAGAT 650
||.||.||||||||.||.|||||.||||||||.|||||.||.|||||.||
BPUM_2896___l 601 CCAACGAAATCAAGCATTATGATTGGACTCGGTGAAACGAAGGAAGAAAT 650
BSNT_04783___ 651 TATTGAAGTAATGGACGACCTTTTGGCGAACAACGTGGATATTATGGCAA 700
.||||||||.|||||.||.|||.|.||.||||||||.|||||||||||.|
BPUM_2896___l 651 CATTGAAGTGATGGATGATCTTCTTGCTAACAACGTCGATATTATGGCGA 700
BSNT_04783___ 701 TCGGCCAATATCTGCAGCCGACGAAGAAACACTTGAAAGTCCAAAAATAC 750
|.||.||.|||.|.|||||..||||.|||||..|.|||||.|||||||||
BPUM_2896___l 701 TTGGTCAGTATTTACAGCCTTCGAAAAAACATCTAAAAGTGCAAAAATAC 750
BSNT_04783___ 751 TACCATCCTGATGAATTTGCAGAATTAAAAGAAATCGCGATGCAAAAAGG 800
||.|||||.|||||.||||||||..|.||||||||.||||||..||||||
BPUM_2896___l 751 TATCATCCGGATGAGTTTGCAGAGCTGAAAGAAATTGCGATGGCAAAAGG 800
BSNT_04783___ 801 CTTCAGCCATTGTGAAGCCGGTCCGCTTGTCCGTTCCTCTTACCATGCGG 850
|||.||||||||||||||.||.||||||||.||.||.||.||||||||.|
BPUM_2896___l 801 CTTTAGCCATTGTGAAGCTGGACCGCTTGTGCGCTCTTCCTACCATGCAG 850
BSNT_04783___ 851 ATGAACAAGTAAACGAAGCATCTAAAAAGCGTCAAGCACAAGCATAA 897
|||||||||||||||||||.||||||||||||||.||.|||||||||
BPUM_2896___l 851 ATGAACAAGTAAACGAAGCGTCTAAAAAGCGTCAGGCGCAAGCATAA 897
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