Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04781 and BPUM_2894

See DNA alignment / Visit BSNT_04781 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:32
# Commandline: needle
#    -asequence pep-align/BSNT_04781.1.24716.seq
#    -bsequence pep-align/BPUM_2894.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04781-BPUM_2894.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04781-BPUM_2894.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04781
# 2: BPUM_2894
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 91
# Identity:      82/91 (90.1%)
# Similarity:    87/91 (95.6%)
# Gaps:           0/91 ( 0.0%)
# Score: 447.0
# 
#
#=======================================

BSNT_04781         1 MILIQNAEFELVHNFKDGFNEEAFKARYSDILNKYDYIVGDWGYGQLRLK     50
                     ||:||||.|:||.:.||||:||||||||||||||||||||||||.|||||
BPUM_2894          1 MIVIQNATFDLVRDIKDGFDEEAFKARYSDILNKYDYIVGDWGYNQLRLK     50

BSNT_04781        51 GFFDDQNQKATFETKISTLDEYIYEYCNFGCAYFVLKRIRK     91
                     ||||||||||||:||||||||||||||||||||||||||||
BPUM_2894         51 GFFDDQNQKATFDTKISTLDEYIYEYCNFGCAYFVLKRIRK     91


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.