Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04781 and BPUM_2894
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:32
# Commandline: needle
# -asequence dna-align/BSNT_04781.1.24716.seq
# -bsequence dna-align/BPUM_2894.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04781-BPUM_2894.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04781-BPUM_2894.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04781
# 2: BPUM_2894
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 280
# Identity: 221/280 (78.9%)
# Similarity: 221/280 (78.9%)
# Gaps: 8/280 ( 2.9%)
# Score: 868.5
#
#
#=======================================
BSNT_04781 1 ATGATTCTTATTCAAAATGCTGAATTTGAATTGGT----GCACAATTTCA 46
|||||..|.|||||.||||||...|||||..|.|| | ||| |.|
BPUM_2894 1 ATGATCGTCATTCAGAATGCTACTTTTGATCTTGTAAGAG-ACA---TTA 46
BSNT_04781 47 AAGACGGCTTCAACGAAGAGGCTTTTAAAGCCCGCTACTCCGATATATTA 96
|||||||.||..|.|||||.||.||||||||..|.|||||.|||||.|||
BPUM_2894 47 AAGACGGTTTTGATGAAGAAGCGTTTAAAGCAAGGTACTCAGATATCTTA 96
BSNT_04781 97 AATAAATACGATTATATTGTGGGAGACTGGGGATACGGTCAGTTAAGGCT 146
|||||.||.||||||||||||||.||||||||.|||..||||.|.||..|
BPUM_2894 97 AATAAGTATGATTATATTGTGGGGGACTGGGGCTACAATCAGCTGAGATT 146
BSNT_04781 147 CAAGGGCTTCTTTGACGACCAGAATCAAAAGGCAACCTTCGAAACGAAAA 196
.|||||.||||||||.|||||.||.||||||||.||.||.||.||.||||
BPUM_2894 147 GAAGGGGTTCTTTGATGACCAAAACCAAAAGGCCACATTTGATACAAAAA 196
BSNT_04781 197 TCAGCACATTAGATGAATATATTTACGAATACTGCAATTTCGGCTGTGCG 246
||||||||.|.||||||||.|||||.||||||||.|||||.||||||||.
BPUM_2894 197 TCAGCACACTCGATGAATACATTTATGAATACTGTAATTTTGGCTGTGCC 246
BSNT_04781 247 TATTTTGTCTTGAAACGGATCAGAAAATAA 276
|||||||||||.|||||.||||||||||||
BPUM_2894 247 TATTTTGTCTTAAAACGAATCAGAAAATAA 276
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