Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04779 and BPUM_2892

See DNA alignment / Visit BSNT_04779 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:32
# Commandline: needle
#    -asequence pep-align/BSNT_04779___yutF.1.24716.seq
#    -bsequence pep-align/BPUM_2892.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04779___yutF-BPUM_2892.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04779___yutF-BPUM_2892.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04779___yutF
# 2: BPUM_2892
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 257
# Identity:     210/257 (81.7%)
# Similarity:   233/257 (90.7%)
# Gaps:           2/257 ( 0.8%)
# Score: 1059.0
# 
#
#=======================================

BSNT_04779___      1 MKTYKGYLIDLDGTMYNGTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTP     50
                     || |||||||||||||.||||||||.:||:.|.:..:|||||||||||||
BPUM_2892          1 MK-YKGYLIDLDGTMYKGTEKIEEAGQFVQKLNELNIPYLFVTNNSSRTP     49

BSNT_04779___     51 KQVADKLVSFDIPATEEQVFTTSMATAQHIAQQKKDASVYVIGEEGIRQA    100
                     ||||:||||||||||||||||||||||.:||:|||||||||||||||:||
BPUM_2892         50 KQVAEKLVSFDIPATEEQVFTTSMATANYIAEQKKDASVYVIGEEGIKQA     99

BSNT_04779___    101 IEENGLTFGGENADFVVVGIDRSITYEKFAVGCLAIRNGARFISTNGDIA    150
                     |||.|||||.|:|||||||||||:||||||||.:|||.||:|:|||||||
BPUM_2892        100 IEEKGLTFGQEDADFVVVGIDRSMTYEKFAVGAIAIRQGAQFVSTNGDIA    149

BSNT_04779___    151 IPTERGLLPGNGSLTSVLTVSTGVQPVFIGKPESIIMEQAMRVLGTDVSE    200
                     ||||||||||||||||||||:|.|||.|||||||||||||||||||||||
BPUM_2892        150 IPTERGLLPGNGSLTSVLTVTTTVQPTFIGKPESIIMEQAMRVLGTDVSE    199

BSNT_04779___    201 TLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAIDSLT    250
                     ||||||||.||||||:||||||||||||||.:|.:.:..::||:.||||:
BPUM_2892        200 TLMVGDNYDTDIMAGMNAGMDTLLVHTGVTTKELLQNYDKQPTYVIDSLS    249

BSNT_04779___    251 EWIPYI-    256
                     |||..: 
BPUM_2892        250 EWIERLS    256


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