Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04775 and BPUM_2890

See DNA alignment / Visit BSNT_04775 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:32
# Commandline: needle
#    -asequence pep-align/BSNT_04775___yutH.1.24716.seq
#    -bsequence pep-align/BPUM_2890___cotS.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04775___yutH-BPUM_2890___cotS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04775___yutH-BPUM_2890___cotS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04775___yutH
# 2: BPUM_2890___cotS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 347
# Identity:     200/347 (57.6%)
# Similarity:   249/347 (71.8%)
# Gaps:          13/347 ( 3.7%)
# Score: 1079.5
# 
#
#=======================================

BSNT_04775___      1 -----MVKGTIKEKYGIHIRQLSMYQHTYQCFQTPNSYFLIVPVSQFSET     45
                          .:|.||...:||.:|||..| .:||.|||..:.|:|||||...|.
BPUM_2890___c      1 MNAGENMKETIYHTFGIDVRQLMPY-GSYQSFQTSEALFIIVPVSHLREE     49

BSNT_04775___     46 ELAELYYMSQYLQEQSDPYVSVFIFTKEGELTFEHEGKTYALLKAAPPYS     95
                     ||.||:::||||....||||:||..|.|.:.||.|..:.|||||||||.|
BPUM_2890___c     50 ELTELFHISQYLLNAGDPYVAVFELTNEEKPTFTHGKELYALLKAAPPIS     99

BSNT_04775___     96 NRAFSIGAELAEFHRKGRGYPYEVKAAGRIGQWKDLWGKRIDQLEAFWQR    145
                     :|:|...:|||.||.:|||:||||....|:|.||:||.||:||||.||.:
BPUM_2890___c    100 SRSFQQASELAAFHVRGRGFPYEVSETKRVGAWKELWAKRLDQLEGFWMQ    149

BSNT_04775___    146 KVQTPPHEPFDKKMIESFPYYLGLSENAIQYLVDTELDDKPQAADSGTIC    195
                     ::...|.|.|:||.||||||||||:||||||||||||||:|:..||||:|
BPUM_2890___c    150 QMHQKPLERFEKKFIESFPYYLGLTENAIQYLVDTELDDEPKECDSGTVC    199

BSNT_04775___    196 HQRMERHTWSPESLIRIPADWVFDHASRDLAEYMRHTFLHHRQDFNQQGF    245
                     |||..|.||..|..:|:|.||||||.:||:|||:|.||:.|::|..::||
BPUM_2890___c    200 HQRFSRRTWPLEQPLRLPVDWVFDHPTRDIAEYLRETFVQHKEDLIEEGF    249

BSNT_04775___    246 LFLQEYEQVTPLSSFSKRLLYSRLLFPLHYFEIVESYYMSSESEKHYFEE    295
                     .|||:||||||||||||||||||||||||||||||.||||.|:||.|:||
BPUM_2890___c    250 SFLQQYEQVTPLSSFSKRLLYSRLLFPLHYFEIVEGYYMSGETEKSYYEE    299

BSNT_04775___    296 QLNFILNDCGRYEQFLNTAQEFMNMRAQKLFVPRVSWLGKGSSG---    339
                     :|:::|||..|||.||...||...||:....:|.|.|:    :|   
BPUM_2890___c    300 RLDYVLNDANRYEYFLKVFQEMSAMRSGGSLIPPVGWI----TGPLI    342


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