Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04770 and BPUM_2885
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:31
# Commandline: needle
# -asequence pep-align/BSNT_04770___yuxL.1.24716.seq
# -bsequence pep-align/BPUM_2885.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04770___yuxL-BPUM_2885.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04770___yuxL-BPUM_2885.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04770___yuxL
# 2: BPUM_2885
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 661
# Identity: 352/661 (53.3%)
# Similarity: 473/661 (71.6%)
# Gaps: 9/661 ( 1.4%)
# Score: 1924.5
#
#
#=======================================
BSNT_04770___ 1 MKKLITADDITAIVSVTDPQYAPDGTRAAYVKSQVNQEKDSYTSNIWIYE 50
||||:||:|:|.||||:.|.|:|||.:|.:.|..||.:||.|..::|:.:
BPUM_2885 1 MKKLMTAEDLTKIVSVSHPVYSPDGKKAVFTKVTVNDKKDDYNIHLWVRD 50
BSNT_04770___ 51 TKTGGSVPWTHGEKRSTDPRWSPDGCTLAFISDREGDAAQLYMMSAEGGE 100
.:|.....||..|.:...|.||.|...||||..:..:|.||.::..|||.
BPUM_2885 51 EETEELSQWTFEEGKHYQPVWSKDSRQLAFILQKPKEAPQLALIQCEGGG 100
BSNT_04770___ 101 ARKLTDIPYGVSKPIWSPDGESILVTVSLGEGGNIDDREKTEQDSYEPVE 150
.|.||.||||||.|::|.||..|...|||....::.|.:|.|:|.:.|..
BPUM_2885 101 VRTLTAIPYGVSHPVFSLDGAFIYAAVSLKPSESVHDEKKEERDEFAPAV 150
BSNT_04770___ 151 VQGLSYKRDGKGLTRGAYAQLVLVSVKSGEMKELTSHKADHGDPAFSPDG 200
...|:||.||:|...|.:.|::||:|.|||::.:||.:..|.:...||.|
BPUM_2885 151 YDDLTYKADGRGFLDGRFTQIILVNVHSGEIEAVTSGQHHHVNHTLSPCG 200
BSNT_04770___ 201 KWLVFSANLTETDDASKPH--DVYIMSLESGDLKQVTPHRGSFGSSSFSP 248
|||.:..: :..||: ||.:.|||.|..|::|...|::.:.||:|
BPUM_2885 201 KWLAYIQS-----NPQKPYISDVCLRSLEDGTTKKITQSSGAYSTVSFAP 245
BSNT_04770___ 249 DGRYLALLGNEKEYKNATLSKAWLYDIEQGRLTCLTEMLDVHLADALIGD 298
:|..|..:|:|:|::|||....||||:::|.:..|:||||:::.:.:.||
BPUM_2885 246 NGESLVYIGHEREFQNATFPALWLYDLKEGNVVQLSEMLDMYVGNCMAGD 295
BSNT_04770___ 299 SLIGGAEQRPIWTKDSQGFYVIGTDQGSTGIYYISIEGLVYPIRLEKEYI 348
|.:|.|.|.|.|||||||||.:.:|||||||||.|:|||.||:|||.|:|
BPUM_2885 296 SFMGEANQLPQWTKDSQGFYALVSDQGSTGIYYFSVEGLAYPVRLEAEHI 345
BSNT_04770___ 349 NSFSLSPDEQHFIASVTKPDRPSELYSIPLGQEE-KQLTGANDKFVREHT 397
.:|||.|||...:.|...|..||||..:.||:.: ||:|..:|:|::||.
BPUM_2885 346 TNFSLHPDESKMLLSRLSPVSPSELCEMTLGEADLKQITFEHDEFLKEHV 395
BSNT_04770___ 398 ISIPEEIQYATEDGVMVNGWLMRPAQMEGETTYPLILNIHGGPHMMYGHT 447
:|:||...:.:::||.|:||.|:|::||...||||||.||||||.|||:|
BPUM_2885 396 LSVPEPFSFQSKEGVEVHGWFMKPSEMEEGKTYPLILEIHGGPHAMYGYT 445
BSNT_04770___ 448 YFHEFQVLAAKGYAVVYINPRGSHGYGQEFVNAVRGDYGGKDYDDVMQAV 497
||||||:|||:|||:|||||.|||||||.|.:.|||.|||.||:||||||
BPUM_2885 446 YFHEFQMLAAEGYAIVYINPHGSHGYGQMFTDHVRGSYGGVDYEDVMQAV 495
BSNT_04770___ 498 DEAIKRDPHIDPKRLGVTGGSYGGFMTNWIVGQTNRFKAAVTQRSISNWI 547
|..:|....:|..|||||||||||||||||||||:||:||||||||||||
BPUM_2885 496 DHVLKAYDFLDETRLGVTGGSYGGFMTNWIVGQTDRFRAAVTQRSISNWI 545
BSNT_04770___ 548 SFHGVSDIGYFFTDWQLEHDMFEDTEKLWDRSPLKYAANVETPLLILHGE 597
||:|:|||||:||.||:|.|:::..:||||||||||...|.|||||||.:
BPUM_2885 546 SFYGISDIGYYFTRWQIEGDIYDSADKLWDRSPLKYVKQVNTPLLILHSD 595
BSNT_04770___ 598 RDDRCPIEQAEQLFIALKKMGKETKLVRFPNASHNLSRTGHPRQRIKRLN 647
.|.|||::||||||:|||::||:|:||:||.|||:|||:|||.|||:||.
BPUM_2885 596 EDYRCPVDQAEQLFVALKELGKDTRLVKFPKASHDLSRSGHPGQRIQRLT 645
BSNT_04770___ 648 YISSWFDQYL- 657
:|..||.:.|
BPUM_2885 646 FIKDWFREKLK 656
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