Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04759 and BPUM_2877

See DNA alignment / Visit BSNT_04759 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:31
# Commandline: needle
#    -asequence pep-align/BSNT_04759___dapF.1.24716.seq
#    -bsequence pep-align/BPUM_2877___dapF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04759___dapF-BPUM_2877___dapF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04759___dapF-BPUM_2877___dapF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04759___dapF
# 2: BPUM_2877___dapF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 284
# Identity:     210/284 (73.9%)
# Similarity:   244/284 (85.9%)
# Gaps:           0/284 ( 0.0%)
# Score: 1137.0
# 
#
#=======================================

BSNT_04759___      1 MNSFRFTKMHGLGNSYIYVNQFEEQLPEEKLSEIAIQVSSVYTGIGSDGM     50
                     |.||:|||||||||:||||||.:|||||||||||||||||:|||||||||
BPUM_2877___d      1 MTSFQFTKMHGLGNNYIYVNQMKEQLPEEKLSEIAIQVSSIYTGIGSDGM     50

BSNT_04759___     51 ILICPSDQAPVKMRIFNNDGSEGKNCGNGLRCVAKYAYEHKLVEETSFLI    100
                     |||||||.||||||||||||||||||||||||||||.|||::|.:|:|.|
BPUM_2877___d     51 ILICPSDVAPVKMRIFNNDGSEGKNCGNGLRCVAKYVYEHQIVTDTTFQI    100

BSNT_04759___    101 ETLSGLVKAEVQVENGKVNVVTVDMGEPRLTKSELPMLDGGEEHTINETM    150
                     |||||||:|.|.|::..|::||||||:||..|..:|||......||||.:
BPUM_2877___d    101 ETLSGLVEATVHVQDDHVHLVTVDMGKPRFEKEAMPMLGEPASTTINEPL    150

BSNT_04759___    151 AFGEVELTGTAVSMGNPHIVFPIADIEQAPLTTLGPVIEKDPRFPEGINV    200
                     .||...|.|||||||||||||.:.|||:|||.||||:|||...||||:||
BPUM_2877___d    151 DFGTTTLNGTAVSMGNPHIVFYLEDIEKAPLDTLGPIIEKHDMFPEGVNV    200

BSNT_04759___    201 EFVETVNEQELHFRVWERGSGITQACGTGACAAAVASVLNGVSKRNQDIT    250
                     ||||.|:|.||||||||||||||||||||||||||::::||.:|:..|:|
BPUM_2877___d    201 EFVEVVSETELHFRVWERGSGITQACGTGACAAAVSTIVNGQAKKETDMT    250

BSNT_04759___    251 VHLAGGDLVINWKDNGHVMMTGPAETVCEGVYFL    284
                     ||||||||:|.||||.||:|||||||:|:|.::|
BPUM_2877___d    251 VHLAGGDLIIRWKDNEHVLMTGPAETICDGTFYL    284


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