Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04725 and BPUM_2873

See DNA alignment / Visit BSNT_04725 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:31
# Commandline: needle
#    -asequence pep-align/BSNT_04725___yumC.1.24716.seq
#    -bsequence pep-align/BPUM_2873.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04725___yumC-BPUM_2873.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04725___yumC-BPUM_2873.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04725___yumC
# 2: BPUM_2873
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 332
# Identity:     293/332 (88.3%)
# Similarity:   321/332 (96.7%)
# Gaps:           0/332 ( 0.0%)
# Score: 1559.0
# 
#
#=======================================

BSNT_04725___      1 MREDTKVYDITIIGGGPVGLFTAFYGGMRQARVKIIESLPQLGGQLSALY     50
                     |:||:||||||:|||||||||||||||||||.||||||||||||||||||
BPUM_2873          1 MQEDSKVYDITVIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALY     50

BSNT_04725___     51 PEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGV    100
                     |||||||||||||||||||::||||||.|||||||||||||:|||||||:
BPUM_2873         51 PEKYIYDVAGFPKIRAQELVDNLKEQMDKFDQTICLEQAVETVEKQADGI    100

BSNT_04725___    101 FKLVTNEETHYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHYFVDDLQ    150
                     ||||||:|.|||||:|||||||||:||||||:.||.:||.|||||::||.
BPUM_2873        101 FKLVTNQEIHYSKTIIITAGNGAFQPRKLELDAAESFEGSNLHYFINDLN    150

BSNT_04725___    151 KFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAHEHSVENLH    200
                     :|||||||:|||||||||||||||||||||||||||||||||||||||||
BPUM_2873        151 QFAGRRVAVLGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAHEHSVENLH    200

BSNT_04725___    201 ASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGFVS    250
                     .|||||:|||||.||||||:|||:||||||||:|::|::||:|||:||||
BPUM_2873        201 NSKVNVVTPFVPTELIGEDRIEQIVLEEVKGDKKQVLDVDDVIVNFGFVS    250

BSNT_04725___    251 SLGPIKNWGLDIEKNSIVVKSTMETNIEGFFAAGDICTYEGKVNLIASGF    300
                     ||||||.|||:|||||||||||||||||||:||||||||||||.||||||
BPUM_2873        251 SLGPIKQWGLEIEKNSIVVKSTMETNIEGFYAAGDICTYEGKVKLIASGF    300

BSNT_04725___    301 GEAPTAVNNAKAYMDPKARVQPLHSTSLFENK    332
                     ||||||||||||||||||||||||||||||||
BPUM_2873        301 GEAPTAVNNAKAYMDPKARVQPLHSTSLFENK    332


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