Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04723 and BPUM_2872
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:31
# Commandline: needle
# -asequence pep-align/BSNT_04723___yumB.1.24716.seq
# -bsequence pep-align/BPUM_2872.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04723___yumB-BPUM_2872.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04723___yumB-BPUM_2872.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04723___yumB
# 2: BPUM_2872
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 419
# Identity: 324/419 (77.3%)
# Similarity: 367/419 (87.6%)
# Gaps: 16/419 ( 3.8%)
# Score: 1727.0
#
#
#=======================================
BSNT_04723___ 1 MGLTKAKKEKVDVMALNKPKIVILGAGYGGLMTVTRLTKYVGPNDADITL 50
:||||||:||||||||||||||||.:|.|||||||
BPUM_2872 1 ---------------MNKPKIVVLGAGYGGLMTVTRLTKQLGTNDADITL 35
BSNT_04723___ 51 VNKHNYHYETTWMHEASAGTLHHDRCRYQIKDVINQSRVNFVQDTVKAIK 100
||||||||||||:||||||||||||||||||||||.|||||||.||::|.
BPUM_2872 36 VNKHNYHYETTWLHEASAGTLHHDRCRYQIKDVINSSRVNFVQATVESIN 85
BSNT_04723___ 101 IDDKKVVLANGELQYDYLVIGLGAVPETFGIKGLKEYAFPIANINTSRLL 150
.::||||.::|||.|||||:.||||||||||.|||||||.|:|||::|.|
BPUM_2872 86 KEEKKVVTSDGELSYDYLVVALGAVPETFGIAGLKEYAFSISNINSARQL 135
BSNT_04723___ 151 REHIELQFATYNTEAEKRPDRLTIVVGGAGFTGIEFLGELAARVPELCKE 200
|||||||||||||||||||:||||||||||||||||||||..||||||||
BPUM_2872 136 REHIELQFATYNTEAEKRPERLTIVVGGAGFTGIEFLGELGNRVPELCKE 185
BSNT_04723___ 201 YDVDRSLVRIICVEAAPTVLPGFDPELVDYAVHYLEENGVEFKIGTAVQE 250
||:|:..|||||||||||.||||||||:|||::||:..|||||||||::|
BPUM_2872 186 YDIDQKDVRIICVEAAPTALPGFDPELIDYAMNYLQGKGVEFKIGTAIKE 235
BSNT_04723___ 251 CTPEGVRVGKKDEEPEQIKSQTVVWAAGVRGHPIVEEAGFENMRGRVKVN 300
|||||:.|| ||::.|:||::||||||||||:|||||||||||||||||:
BPUM_2872 236 CTPEGIIVG-KDDDTEEIKAETVVWAAGVRGNPIVEEAGFENMRGRVKVS 284
BSNT_04723___ 301 PDLRAPGHDNVFILGDSSLFMNEDTERPYPPTAQIAMQQGITVAKNLGRL 350
||||.|.:|:|||:||.||.:||:..||||||||||||||.|||||||.|
BPUM_2872 285 PDLRVPENDDVFIIGDCSLIINEEINRPYPPTAQIAMQQGETVAKNLGAL 334
BSNT_04723___ 351 IKGGELEEFKPDIKGTVASLGEHNAVGVVYGRKLKGTPASFMKKVIDNRS 400
:|||.||.|||||||||||||||:||||.:|:||:||.||.|||:|||||
BPUM_2872 335 VKGGSLESFKPDIKGTVASLGEHDAVGVAFGKKLQGTKASAMKKIIDNRS 384
BSNT_04723___ 401 LFMIGGLGLTLKKGKFKFF 419
|||:||.||.|||||||||
BPUM_2872 385 LFMVGGPGLVLKKGKFKFF 403
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