Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04718 and BPUM_2869
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:30
# Commandline: needle
# -asequence pep-align/BSNT_04718___yuiC.1.24716.seq
# -bsequence pep-align/BPUM_2869.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04718___yuiC-BPUM_2869.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04718___yuiC-BPUM_2869.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04718___yuiC
# 2: BPUM_2869
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 220
# Identity: 132/220 (60.0%)
# Similarity: 161/220 (73.2%)
# Gaps: 9/220 ( 4.1%)
# Score: 671.5
#
#
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BSNT_04718___ 1 MLNMIRRLLMTCLFLLAFGTTFLSVSGIEAKDLSKWVQEHQEKHLKHAGL 50
|...::||.||.||:||..|:|..:||:|..|::.||:| ...|.
BPUM_2869 1 MKTWMKRLFMTALFMLALLTSFTGISGVEPSDVAAWVKE------ADPGK 44
BSNT_04718___ 51 TLKALQQKQTQTTSAA---EDKTKPLEEAFDWDEYPVQRVTATGYTAGAE 97
.:.:..|:|.:.|.|. |.:...|||||:|::||.|:|.|||||||.|
BPUM_2869 45 QVSSFFQQQKRETMALKSDELRANSLEEAFNWNDYPKQKVVATGYTAGVE 94
BSNT_04718___ 98 STGKNPGDPLYGLTYSGVKVKRDLYSTVAADPSVFPIGTILFIPNYGLGV 147
||||......||:||||||||||||||||||||||||||:|||||||.||
BPUM_2869 95 STGKTKEHHAYGITYSGVKVKRDLYSTVAADPSVFPIGTVLFIPNYGYGV 144
BSNT_04718___ 148 VADTGSAIKGNRLDLYFETVKDVYNEWGKKTLDVYVIKKGTGKITEDELE 197
|||||.||||::||||:|||.|||.|||||.|||||||||.|.:||.:|.
BPUM_2869 145 VADTGKAIKGHKLDLYYETVDDVYREWGKKVLDVYVIKKGEGTLTEKDLN 194
BSNT_04718___ 198 KLNETKSLQVFRNQYKTVKE 217
:|||.||:||||.|::..||
BPUM_2869 195 ELNEAKSMQVFRQQFQANKE 214
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