Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04718 and BPUM_2869
See
Amino acid alignment /
Visit
BSNT_04718 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:30
# Commandline: needle
# -asequence dna-align/BSNT_04718___yuiC.1.24716.seq
# -bsequence dna-align/BPUM_2869.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04718___yuiC-BPUM_2869.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04718___yuiC-BPUM_2869.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04718___yuiC
# 2: BPUM_2869
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 722
# Identity: 438/722 (60.7%)
# Similarity: 438/722 (60.7%)
# Gaps: 145/722 (20.1%)
# Score: 1219.5
#
#
#=======================================
BSNT_04718___ 1 ATGTTGAATAT-GATCAGACGTTTGCTGATGA----CCTGTTTATTTCTG 45
||| ..||.|| |||.|.|||.|||.|.|||| |||.|||| ||
BPUM_2869 1 ATG-AAAACATGGATGAAACGATTGTTCATGACAGCCCTTTTTA----TG 45
BSNT_04718___ 46 CTTG--CATTTGGCACGACATTTTTATCAG---TGTCAGGAATTG----A 86
|||| |.||||.|| |..|||| |.| |.||.|||.||| |
BPUM_2869 46 CTTGCTCTTTTGACA----AGCTTTA-CGGGCATATCTGGAGTTGAACCA 90
BSNT_04718___ 87 AGCGAAGGACTTGTCAAAATGGGTGCAGGAACATCAGGAAAAGCACTTGA 136
||.||.|.|..||.| |||||| ||||
BPUM_2869 91 AGTGATGTAGCTGCC----TGGGTG--------------AAAG------- 115
BSNT_04718___ 137 AGCATGCAGGA--CTGACATTAAAAGCA-------------TTGCAGCAG 171
|.|| ||| |||.| ||||| ||.||.|||
BPUM_2869 116 ---AGGC-GGATCCTGGC-----AAGCAAGTATCTTCTTTTTTCCAACAG 156
BSNT_04718___ 172 AAACAAACACAAAC-----CACGTCCGCGGCTGAGGATAAAA-------- 208
.||.|||.|.|||| ||| || ||||
BPUM_2869 157 CAAAAAAGAGAAACGATGGCAC-TC-------------AAAAGTGATGAG 192
BSNT_04718___ 209 -------CTAAACCGTTAGAAGAGGCATTTGATTGGGATGAATATCC--A 249
||||..|..|.|||||.||.|||.|||||.||||.||.|| |
BPUM_2869 193 TTGCGGGCTAATTCTCTCGAAGAAGCGTTTAATTGGAATGATTACCCGAA 242
BSNT_04718___ 250 GTCCAAAGAGTAACAGCAACAGGCTACACAGCAGGAGCTGAGTCGACGGG 299
| ||||..||....||.|||||.||.||||||||.|..||.||.||.||
BPUM_2869 243 G--CAAAAGGTTGTTGCCACAGGTTATACAGCAGGTGTGGAATCAACAGG 290
BSNT_04718___ 300 CAAA-------AATCCCGGTGATCCATTATACGGGC-TTACATATTCAGG 341
.||| ||..|| ||.|| ||| ||| |||||||||||||
BPUM_2869 291 TAAAACGAAAGAACACC----ATGCA-TAT---GGCATTACATATTCAGG 332
BSNT_04718___ 342 TGTGAAAGTGAAACGGGATTTATATTCCACGGTTGCTGCTGACCCGTCCG 391
.||.|||||.|||||.|||||||||||.||.||.||.||.|||||.||||
BPUM_2869 333 CGTCAAAGTAAAACGTGATTTATATTCAACTGTGGCGGCGGACCCATCCG 382
BSNT_04718___ 392 TTTTCCCGATCGGAACAATTTTATTCATTCCGAACTACGGTCT-CGGCGT 440
|.||.||.||.|||||..|..|.||.||.||.|||||.|| || |||.||
BPUM_2869 383 TCTTTCCAATTGGAACGGTGCTCTTTATCCCAAACTATGG-CTACGGAGT 431
BSNT_04718___ 441 TGTAGCCGACACAGGATCAGCTATTAAGGG----AAACCGCCTTGATCTG 486
.||.||.||.||.|||..|||.|||||.|| || .||||||.|.
BPUM_2869 432 GGTCGCAGATACGGGAAAAGCCATTAAAGGTCATAA----GCTTGATTTA 477
BSNT_04718___ 487 TACTTTGAGACAGTCAAAGATGTATACAATGAATGGGGCAAAAAAACCCT 536
||||.|||.||.||..|.|||||.||.|..|||||||||||||||...||
BPUM_2869 478 TACTATGAAACCGTAGATGATGTGTATAGAGAATGGGGCAAAAAAGTGCT 527
BSNT_04718___ 537 TGATGTATATGTGATTAAAAAGGGAACG--GGAAAGATTACCGAGGATGA 584
.|||||.|||||.||.||.||||| || ||||.|.|.||.||..|.||
BPUM_2869 528 CGATGTGTATGTCATCAAGAAGGG--CGAAGGAACGTTAACGGAAAAAGA 575
BSNT_04718___ 585 GCTTGAGA--AGCTCAATGAAACAAAATCTTTGCAAGTGTTCAGAAATCA 632
||||| | ||||.||||||.|||||||..|||||||.|||.|..|.||
BPUM_2869 576 -CTTGA-ACGAGCTGAATGAAGCAAAATCAATGCAAGTATTCCGTCAGCA 623
BSNT_04718___ 633 ATATAAAACGGTGAAAGAATAA 654
.|.|.||.|....|||||||||
BPUM_2869 624 GTTTCAAGCCAATAAAGAATAA 645
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.