Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01489 and BPUM_2864

See DNA alignment / Visit BSNT_01489 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:02
# Commandline: needle
#    -asequence pep-align/BSNT_01489___spo0M.1.24716.seq
#    -bsequence pep-align/BPUM_2864___spo0M.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01489___spo0M-BPUM_2864___spo0M.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01489___spo0M-BPUM_2864___spo0M.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01489___spo0M
# 2: BPUM_2864___spo0M
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 258
# Identity:     205/258 (79.5%)
# Similarity:   235/258 (91.1%)
# Gaps:           0/258 ( 0.0%)
# Score: 1105.0
# 
#
#=======================================

BSNT_01489___      1 MSFFKKLAASAGIGAAKVDTILEKDAYFPGEEVQGTVHVKGGKIAQDIRY     50
                     ||||||||||||||||||||||||:||:||::|:||||||||||:|||||
BPUM_2864___s      1 MSFFKKLAASAGIGAAKVDTILEKNAYYPGQDVRGTVHVKGGKISQDIRY     50

BSNT_01489___     51 IDLQLSTRYVIVKDDEEHRKYATIHSFRVTGSFTIQPGEEHQFPFTFTLP    100
                     |::::.|:|||||||||||||..|.:.|||.||||||.|:|:|||:|.||
BPUM_2864___s     51 INVKIQTQYVIVKDDEEHRKYVNIFTLRVTDSFTIQPEEKHEFPFSFILP    100

BSNT_01489___    101 LDTPMTVGKVEVTVVTDLDIQGGIDKSDHDRIFVEAHPWIENVLEAIENL    150
                     :|||||:||||:.|:|||||||||||||:||||||||||:.|||||..||
BPUM_2864___s    101 IDTPMTIGKVEIAVMTDLDIQGGIDKSDYDRIFVEAHPWVRNVLEATRNL    150

BSNT_01489___    151 GFRLNEADCEQAPYFRRRLPFVQEFEFVPTSGYYRQMLDELELIFLLDED    200
                     ||.||||||||||||:|||||||||||:|||..||.||||||||||:||.
BPUM_2864___s    151 GFHLNEADCEQAPYFQRRLPFVQEFEFIPTSDVYRYMLDELELIFLIDEG    200

BSNT_01489___    201 GLEIIFEVDRRARGLRGWLEEMYNDGEQLVRVRFSQSELEDAEELEEVLE    250
                     ||:|:||||||||||||||||||||||||||.|||.::|||.|.||.:||
BPUM_2864___s    201 GLDIVFEVDRRARGLRGWLEEMYNDGEQLVRYRFSPADLEDIEVLEGMLE    250

BSNT_01489___    251 EILDQYAE    258
                     .|:|||||
BPUM_2864___s    251 GIIDQYAE    258


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.