Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01489 and BPUM_2864

See Amino acid alignment / Visit BSNT_01489 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:02
# Commandline: needle
#    -asequence dna-align/BSNT_01489___spo0M.1.24716.seq
#    -bsequence dna-align/BPUM_2864___spo0M.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01489___spo0M-BPUM_2864___spo0M.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01489___spo0M-BPUM_2864___spo0M.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01489___spo0M
# 2: BPUM_2864___spo0M
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 782
# Identity:     624/782 (79.8%)
# Similarity:   624/782 (79.8%)
# Gaps:          10/782 ( 1.3%)
# Score: 2437.5
# 
#
#=======================================

BSNT_01489___      1 ATGTCATTTTTTAAGAAACTTGCGGCAAGTGCCGGAATTGGAGCTGCAAA     50
                     ||||||||||||||.||.||.|||||||||||.||.|||||.||.||.||
BPUM_2864___s      1 ATGTCATTTTTTAAAAAGCTAGCGGCAAGTGCTGGGATTGGTGCAGCGAA     50

BSNT_01489___     51 AGTAGATACAATTTTAGAAAAAGACGCATATTTTCCAGGAGAAGAAGTAC    100
                     |||||||||.|||||.||.|||.||||.||||.|||||||.||||.|||.
BPUM_2864___s     51 AGTAGATACCATTTTGGAGAAAAACGCCTATTATCCAGGACAAGATGTAA    100

BSNT_01489___    101 AGGGAACGGTACATGTCAAAGGCGGAAAAATCGCTCAGGACATCCGTTAT    150
                     .||||||.||.|||||.||.|||||.||||||.||||||||||.||.|||
BPUM_2864___s    101 GGGGAACCGTCCATGTAAAGGGCGGGAAAATCTCTCAGGACATTCGCTAT    150

BSNT_01489___    151 ATCGATTTACAGCTTAGCACACGGTATGTCATTGTAAAAGACGATGAAGA    200
                     |||.||.|..||.||...||||.||||||.|||||||||||.||||||||
BPUM_2864___s    151 ATCAATGTCAAGATTCAAACACAGTATGTGATTGTAAAAGATGATGAAGA    200

BSNT_01489___    201 GCACCGGAAATACGCTACAAT-TCATT-CTTTCCGGGTCACTGGTTCATT    248
                     |||..|.|||||.|  ..||| ||.|| ||||.|||||.||.|.|||.||
BPUM_2864___s    201 GCATAGAAAATATG--TGAATATCTTTACTTTACGGGTGACGGATTCTTT    248

BSNT_01489___    249 TACCATACAGCCTGGTGAAGAGCATCAATTTCCGTTTACATTCACTCTGC    298
                     ||||||.|||||||..|||.|.|||.|||||||||||.||||.|.|||.|
BPUM_2864___s    249 TACCATCCAGCCTGAAGAAAAACATGAATTTCCGTTTTCATTTATTCTTC    298

BSNT_01489___    299 CTCTAGATACGCCGATGACTGTAGGGAAAGTAGAGGTTACCGTGGTGACA    348
                     ||.|.|||||.||||||||..|.||.||||||||..||.|.||..|||||
BPUM_2864___s    299 CTATCGATACCCCGATGACGATCGGAAAAGTAGAAATTGCAGTAATGACA    348

BSNT_01489___    349 GACCTTGACATTCAAGGCGGTATCGATAAATCCGATCATGACCGCATTTT    398
                     ||||||||.||.||||||||.||.||||||||.||..|||||||||||||
BPUM_2864___s    349 GACCTTGATATCCAAGGCGGAATTGATAAATCGGACTATGACCGCATTTT    398

BSNT_01489___    399 CGTTGAAGCGCACCCTTGGATTGA-AAATGTGCTGGAAGCAATCGA-AAA    446
                     |||||||||.||.|||||| .||| ||||||.|||||.||.| |.| |||
BPUM_2864___s    399 CGTTGAAGCACATCCTTGG-GTGAGAAATGTACTGGAGGCCA-CTAGAAA    446

BSNT_01489___    447 CCTGGGCTTCCGTCTTAACGAAGCAGACTGTGAACAAGCGCCCTACTTCC    496
                     .||.|||||||..||.|||||||||||||||||.|||||.||.|||||||
BPUM_2864___s    447 TCTTGGCTTCCACCTGAACGAAGCAGACTGTGAGCAAGCCCCTTACTTCC    496

BSNT_01489___    497 GACGCCGCCTTCCGTTCGTTCAAGAATTCGAATTCGTTCCGACTTCCGGA    546
                     ..||||||||.||.|||||.|||||||||||.|||.|||||||.| |.||
BPUM_2864___s    497 AGCGCCGCCTGCCATTCGTCCAAGAATTCGAGTTCATTCCGACAT-CAGA    545

BSNT_01489___    547 TAT-TATCGTCAGATGCTTGATGAATTAGAGCTCATTTTCCTTTTAGACG    595
                     |.| ||||||.|.||||||||||||||||||.|.|||||.||..||||.|
BPUM_2864___s    546 TGTCTATCGTTATATGCTTGATGAATTAGAGTTGATTTTTCTAATAGATG    595

BSNT_01489___    596 AAGACGGTTTGGAAATCATTTTCGAAGTCGACCGCAGGGCAAGAGGACTG    645
                     |||.|||.||.||.||..|.||.||||||||||||||.||||||||.||.
BPUM_2864___s    596 AAGGCGGCTTAGACATTGTGTTTGAAGTCGACCGCAGAGCAAGAGGCCTC    645

BSNT_01489___    646 CGAGGATGGCTGGAAGAGATGTATAATGACGGAGAACAGCTTGTACGCGT    695
                     .||||.|||||.||.|||||||||||.||.|||||||||||.||||||..
BPUM_2864___s    646 AGAGGGTGGCTTGAGGAGATGTATAACGATGGAGAACAGCTGGTACGCTA    695

BSNT_01489___    696 CCGTTTCAGCCAATCAGAGCTTGAAGATGCAGAAGAGCTTGAAGAGGTGT    745
                     |||||||||.|.|.||||.|||||||||..|||||.||||||||.|.||.
BPUM_2864___s    696 CCGTTTCAGTCCAGCAGATCTTGAAGATATAGAAGTGCTTGAAGGGATGC    745

BSNT_01489___    746 TAGAAGAGATCTTAGACCAATACGCTGAGTAA    777
                     ||||||..|||.|.||.||||||||.||||||
BPUM_2864___s    746 TAGAAGGAATCATCGATCAATACGCAGAGTAA    777


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_01489 and BPUM_2864

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
