Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04692 and BPUM_2858

See DNA alignment / Visit BSNT_04692 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:29
# Commandline: needle
#    -asequence pep-align/BSNT_04692___yukC.1.24716.seq
#    -bsequence pep-align/BPUM_2858.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04692___yukC-BPUM_2858.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04692___yukC-BPUM_2858.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04692___yukC
# 2: BPUM_2858
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 454
# Identity:     230/454 (50.7%)
# Similarity:   313/454 (68.9%)
# Gaps:          19/454 ( 4.2%)
# Score: 1123.5
# 
#
#=======================================

BSNT_04692___      1 MSGKQKSYLENQLEAVAEKTDAGYTFTFQREKIKLLDGLEANVIKDINPF     50
                     |:.|:.||||.|||||.:|....|:|.||||.|||||||||..||||||.
BPUM_2858          1 MADKKSSYLEEQLEAVMKKEGGTYSFIFQRETIKLLDGLEAAPIKDINPS     50

BSNT_04692___     51 FYKEIDVTDDEVIITIQPPSSYKAFRFMKAKDKKSKWQFAYQLVQAVQQH    100
                     |.|||.:|:|||:|:||||.:|:.|||:.|||:||||.|:||||.||.:|
BPUM_2858         51 FKKEIQLTEDEVMISIQPPPAYQEFRFIHAKDEKSKWIFSYQLVDAVCKH    100

BSNT_04692___    101 NLSRLNLIVAPENIVFDKGLTPYFLHYGVKESIPPYERDEERVWQELKAA    150
                     ::.||:.||:||||||.:||.|.||||||||||||||.||:|:.:|:||.
BPUM_2858        101 DVKRLHPIVSPENIVFHQGLAPAFLHYGVKESIPPYETDEQRLLKEVKAV    150

BSNT_04692___    151 AALAVDGAFAFEDYLKFNETLTFSAEAKAILDTESYDDLLELIQIHIDEL    200
                     ....||..:.|::|:.::|||..|..||.|.:|:|.::|..|||..|:.:
BPUM_2858        151 ILRVVDHEYQFQEYVAYSETLKLSELAKEISETQSLEELSALIQQKIEAI    200

BSNT_04692___    201 EAKAKTYIHIPRKKWNIQRYIGLGLIVLLVPALIYSMYALFFAQPKHQAI    250
                     |.|.||.:.||:|||.|:|||||||:|||:|||:|::|..|||.||.:|.
BPUM_2858        201 ETKEKTLLTIPKKKWKIERYIGLGLLVLLIPALVYTIYTFFFAMPKQEAY    250

BSNT_04692___    251 VDSNRAFLNKQYSEVISTLSKYEAESLPESVQYQLATSYVEVE--NLGSA    298
                     |::|:.:||||||:|:.||.||.|..:|.|:||:||.|||:..  ||...
BPUM_2858        251 VEANKYYLNKQYSQVVDTLEKYSANQMPVSLQYELAISYVQTNQGNLLLD    300

BSNT_04692___    299 KTKNIENNLVTLQSDPQHFLYWIDYGRGEYKEAISIGRKLEYNDYIYFAL    348
                     :.|....:..|||:|||:||:||..|:|..|||:.|.|.|..:.||:.||
BPUM_2858        301 QHKKEITDTYTLQTDPQYFLFWIHIGQGNSKEALDIARVLGDDRYIFTAL    350

BSNT_04692___    349 AKYKQQLLSEDT-NDEDIQKELDSVNSELEKAQKERQENKQSNSETSLVD    397
                     ..|:..:.::|: :.|:.||:||.:..|:  |..|.:|    .:|||..|
BPUM_2858        351 VAYRNDIQNDDSLSAEEKQKQLDPIIKEM--ANYEEKE----TTETSTND    394

BSNT_04692___    398 TSEEQTQTDEEKQAEEKAAEEKAAAEEKAKKEEQKKKEDEKKETEKKDEK    447
                     :|...:||||   |.|:..:.||..|:|.|:.|.|||..:.|:.|||   
BPUM_2858        395 SSGGASQTDE---AAEQKEQSKADQEKKEKESEVKKKTSQTKKDEKK---    438

BSNT_04692___    448 KDDK    451
                         
BPUM_2858        438 ----    438


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