Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04678 and BPUM_2850
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:27
# Commandline: needle
# -asequence pep-align/BSNT_04678___yueF.1.24716.seq
# -bsequence pep-align/BPUM_2850.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04678___yueF-BPUM_2850.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04678___yueF-BPUM_2850.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04678___yueF
# 2: BPUM_2850
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 369
# Identity: 252/369 (68.3%)
# Similarity: 312/369 (84.6%)
# Gaps: 2/369 ( 0.5%)
# Score: 1362.0
#
#
#=======================================
BSNT_04678___ 1 MLKSKVHFWTLQILFVLLIIFVATKVSFVFQPFIVFISTLFFPMLIAGIL 50
||||||||||.|||.||||::|:|||||:|||.|:|.||||.|:|:||||
BPUM_2850 1 MLKSKVHFWTFQILLVLLIVYVSTKVSFLFQPIILFASTLFVPILLAGIL 50
BSNT_04678___ 51 YFIFNPVVRLLEKKIPRTLSILLIYLLFIGLLAFISASVGPIITSQVTGL 100
:|||||:||.|.|||||||:||:||||||||:.||..:.||:|.|||.||
BPUM_2850 51 FFIFNPIVRFLSKKIPRTLAILIIYLLFIGLITFIVNAAGPVIISQVGGL 100
BSNT_04678___ 101 FNNLPDYIKQIQALTKDLSHSQWFTWMMNQDYVSISKIEQSLTSFLQNLP 150
..:.|.|:..:|....|.|||:.|||||:|||||:||.||::.|.|:.||
BPUM_2850 101 VKSFPGYVTDMQKFINDFSHSKTFTWMMSQDYVSVSKFEQTVVSTLKALP 150
BSNT_04678___ 151 QNITSSLSAVFGVVTNITLVIITVPFILFYMLKDGHRFPHLAVKILPASY 200
:||.||:||||||:.||.|.:|||||||||||||||:||...|:.||..|
BPUM_2850 151 ENIASSMSAVFGVIANIALAVITVPFILFYMLKDGHKFPDKLVQFLPMPY 200
BSNT_04678___ 201 RTEGLKIFKDLSDTLAAYFQGQLLICLFVGTACFIGYLIAGLPYALILGI 250
|.|||||||:|:||||||.|||:::|||||.|||||||:.|:.|||||||
BPUM_2850 201 RKEGLKIFKELNDTLAAYIQGQIIVCLFVGVACFIGYLLIGVKYALILGI 250
BSNT_04678___ 251 VMAITNIIPYVGPFLGAAPAVIVGFMDSPAKALFAIIVVVIVQQLDGNLL 300
::|:||:|||:||:|||||||::.|:|||.||:..:||:::|||:|||::
BPUM_2850 251 IIAVTNVIPYLGPYLGAAPAVLIAFLDSPGKAVVTVIVILVVQQIDGNVI 300
BSNT_04678___ 301 SPLVIGKRLNTHPLTIILLLIGAGSFGGILGMILAVPVYAVVKAFFLNIV 350
|||:|||||||||||||||||||||||||||||.||||||::||..||||
BPUM_2850 301 SPLIIGKRLNTHPLTIILLLIGAGSFGGILGMIFAVPVYALLKAITLNIV 350
BSNT_04678___ 351 RLIKLRQRSRLEENAKPAE 369
||::||||||.|::...
BPUM_2850 351 RLVQLRQRSRKEQHLNV-- 367
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