Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04673 and BPUM_2846

See DNA alignment / Visit BSNT_04673 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:27
# Commandline: needle
#    -asequence pep-align/BSNT_04673___yueI.1.24716.seq
#    -bsequence pep-align/BPUM_2846.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04673___yueI-BPUM_2846.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04673___yueI-BPUM_2846.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04673___yueI
# 2: BPUM_2846
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 135
# Identity:      72/135 (53.3%)
# Similarity:    97/135 (71.9%)
# Gaps:           3/135 ( 2.2%)
# Score: 378.0
# 
#
#=======================================

BSNT_04673___      1 MSEDKMDLYLQQGMYGPLETKPDERHLFLGSLRERVVLALTKGQVLRSKP     50
                     |.|:.:|.|||||::|..|||||||.:||||||||.:||||||||.|:||
BPUM_2846          1 MKEESVDFYLQQGIFGHAETKPDERRMFLGSLRERALLALTKGQVSRNKP     50

BSNT_04673___     51 YKEAEHELKNSHNVTLLVNGELQYQSYSPYIQMANRYGVPFKIVSDLQFH    100
                     |:|.|..||.:...|:|:||||.|.|||.|::|||..|..||:|:..:.|
BPUM_2846         51 YQEVEQVLKANRQSTVLLNGELSYASYSQYVKMANAAGCSFKVVNHHEAH    100

BSNT_04673___    101 TPLGLVIAADIAVNRELIYIQDDIYNRSVLKS---    132
                     :|.||||....|||:|.|||:|:::.::..:.   
BPUM_2846        101 SPFGLVIELPNAVNQEHIYIEDELFQKAFSQESVE    135


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