Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04666 and BPUM_2840

See DNA alignment / Visit BSNT_04666 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:26
# Commandline: needle
#    -asequence pep-align/BSNT_04666___comQ.1.24716.seq
#    -bsequence pep-align/BPUM_2840.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04666___comQ-BPUM_2840.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04666___comQ-BPUM_2840.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04666___comQ
# 2: BPUM_2840
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 308
# Identity:     125/308 (40.6%)
# Similarity:   188/308 (61.0%)
# Gaps:          22/308 ( 7.1%)
# Score: 621.0
# 
#
#=======================================

BSNT_04666___      1 -------------MKEIVDENILNEDLKVKLISFIKEKKQFSFAELAYYH     37
                                  |.:.:...:..:||:..|:.|...|.:|.|.:|||.|
BPUM_2840          1 MLNYLENTKIKQNMSDFIQHAVRQKDLQKLLLEFTDIKNEFPFGQLAYKH     50

BSNT_04666___     38 YIAFDGKNDKAIELLASGIELLILSADIFDDIEDKDNLQASWMKLDPSIA     87
                     |.||.|::.:||..||:|||||||||||.|||||:|.....||:....:|
BPUM_2840         51 YEAFGGQDKQAITQLAAGIELLILSADILDDIEDQDKDSYPWMRCQSGVA    100

BSNT_04666___     88 TNAATALYTLSLQVIGSVSNHPKLLSLTLQYSLQSLQGQHVDLNLTASSE    137
                     .|||..|:.||..|...:.:..:|::....||:||:||||:|:.:...:|
BPUM_2840        101 MNAANVLFALSFGVFSKLDHATELINSVYSYSIQSMQGQHLDMTVEPENE    150

BSNT_04666___    138 SEYIEMIKLKSGSLVTLPSILGVYLATGEYNETVEEYSRYLGIVEQIAND    187
                     .:.:.:::||:|||..||.:|||.||||.:.:.||||:.|||:.||:.||
BPUM_2840        151 QDCLNIMRLKAGSLFVLPCMLGVILATGSFEKKVEEYAYYLGMAEQLEND    200

BSNT_04666___    188 HYGLYYPNYNDFKTRHTLAFNYLKNKFNQSSIDLLNFYAQENHMINNLED    237
                     :.||:..:..|||...||...||||:||.||.|||:::..::..:.: |:
BPUM_2840        201 YLGLFNKDNIDFKRMQTLPLVYLKNEFNPSSSDLLSYFQSKDKSVGS-EE    249

BSNT_04666___    238 LKGKLRESGVIQYLNVIKNLAVENFKESFKKLRLDEQRKNKLLIQLL---    284
                     ||.||::||..||:.:::||.....||:||||.|:..:|.||::.|:   
BPUM_2840        250 LKDKLKKSGAQQYVFIMRNLLRNKCKEAFKKLHLEASKKKKLILFLIGDG    299

BSNT_04666___    285 ----RGI-    287
                         .|| 
BPUM_2840        300 EDENSGIG    307


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