Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04660 and BPUM_2836

See DNA alignment / Visit BSNT_04660 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:26
# Commandline: needle
#    -asequence pep-align/BSNT_04660___yuxO.1.24716.seq
#    -bsequence pep-align/BPUM_2836.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04660___yuxO-BPUM_2836.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04660___yuxO-BPUM_2836.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04660___yuxO
# 2: BPUM_2836
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 129
# Identity:      81/129 (62.8%)
# Similarity:    95/129 (73.6%)
# Gaps:           2/129 ( 1.6%)
# Score: 404.0
# 
#
#=======================================

BSNT_04660___      1 -MMDTKHTLLEALGIEIVENTAERCVAVMPVDHRTVQPFGYLHGGASVAL     49
                      .:...:||||||||||||....||||.|||||||.||||.||||||.||
BPUM_2836          1 MEVSGSNTLLEALGIEIVECNESRCVATMPVDHRTKQPFGLLHGGASAAL     50

BSNT_04660___     50 AETAASAGAQNLIDHSTQACVGLEINANHLKSVKEGTVKAIAEPVHIGRT     99
                     |||.||.||...:|.:.|.|.|:||||||||||::|.|.|.|.|||:||.
BPUM_2836         51 AETVASMGAAAHLDLTQQVCSGIEINANHLKSVRDGVVTATAVPVHVGRR    100

BSNT_04660___    100 TIVYHIHIYDEQERLICISRCTLAVIKK-    127
                     |:|:.|.|.|:::|.||.||||||||.: 
BPUM_2836        101 TMVFQIDIKDDRDRHICTSRCTLAVIDRI    129


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.