Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04658 and BPUM_2834

See DNA alignment / Visit BSNT_04658 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:26
# Commandline: needle
#    -asequence pep-align/BSNT_04658___mrpF.1.24716.seq
#    -bsequence pep-align/BPUM_2834___mrpF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04658___mrpF-BPUM_2834___mrpF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04658___mrpF-BPUM_2834___mrpF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04658___mrpF
# 2: BPUM_2834___mrpF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 94
# Identity:      71/94 (75.5%)
# Similarity:    86/94 (91.5%)
# Gaps:           1/94 ( 1.1%)
# Score: 360.0
# 
#
#=======================================

BSNT_04658___      1 MFTLILQIALGIMAVSTFLYVIRVIKGPTVPDRVVALDAIGINLIAITAL     50
                      ..:||||:|||:|:||.|:||||||||::||||.||||||||||.:||:
BPUM_2834___m      1 -MEIILQISLGILALSTLLFVIRVIKGPSIPDRVSALDAIGINLIGMTAI     49

BSNT_04658___     51 VSILLKTSAFLDIILLLGILSFIGTIAFSKFLEKGEIIENDRNR     94
                     |||||||:.|.:||||||||:||||:||||||||||:|||||:|
BPUM_2834___m     50 VSILLKTTTFFEIILLLGILAFIGTVAFSKFLEKGEVIENDRHR     93


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.