Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04658 and BPUM_2834

See Amino acid alignment / Visit BSNT_04658 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:26
# Commandline: needle
#    -asequence dna-align/BSNT_04658___mrpF.1.24716.seq
#    -bsequence dna-align/BPUM_2834___mrpF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04658___mrpF-BPUM_2834___mrpF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04658___mrpF-BPUM_2834___mrpF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04658___mrpF
# 2: BPUM_2834___mrpF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 286
# Identity:     206/286 (72.0%)
# Similarity:   206/286 (72.0%)
# Gaps:           5/286 ( 1.7%)
# Score: 699.0
# 
#
#=======================================

BSNT_04658___      1 ATGTTTACGCTGATCCTGCAAATCGCGCTCGGCATTATGGCAGTGTCTAC     50
                     |||   ..|.|.|||.|.|||||..|.||.||.|||.|.||..||||.||
BPUM_2834___m      1 ATG---GAGATCATCTTACAAATTTCACTTGGGATTCTTGCCCTGTCCAC     47

BSNT_04658___     51 CTTTTTGTATGTCATTCGTGTCATTAAAGGGCCGACTGTGCCTGACCGGG    100
                     |.||.|||.|||.||.||.||.||.|||||.||..||.|.||||||||.|
BPUM_2834___m     48 CCTTCTGTTTGTTATACGAGTGATCAAAGGTCCCTCTATCCCTGACCGTG     97

BSNT_04658___    101 T-GGTGGCTCTGGATGCAATCGGCATCAATCTGATCGCAATCACGGCGCT    149
                     | .|| ||.||.|||||.||.||.||||||.|.||.|.|||.||.||..|
BPUM_2834___m     98 TAAGT-GCACTTGATGCGATAGGAATCAATTTAATTGGAATGACAGCCAT    146

BSNT_04658___    150 TGTCTCCATTTTGCTGAAAACAAGTGCGTTTTTGGATATTATTTTGCTGC    199
                     .||.|||||||||||||||||.|...||||.||.||.||||||||.||||
BPUM_2834___m    147 CGTTTCCATTTTGCTGAAAACGACAACGTTCTTTGAAATTATTTTACTGC    196

BSNT_04658___    200 TGGGGATTTTATCGTTTATCGGAACAATCGCATTTTCCAAGTTCCTGGAG    249
                     |.||.||..|..|.||||||||.||..||||.||||||||.|||||.|||
BPUM_2834___m    197 TCGGTATCCTTGCATTTATCGGCACTGTCGCTTTTTCCAAATTCCTTGAG    246

BSNT_04658___    250 AAAGGAGAGATTATCGAAAATGATCGAAACCGCTAA    285
                     |||||.||..|.||.|||||||||||..|.||||||
BPUM_2834___m    247 AAAGGGGAAGTGATTGAAAATGATCGTCATCGCTAA    282


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