Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04656 and BPUM_2833

See DNA alignment / Visit BSNT_04656 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:26
# Commandline: needle
#    -asequence pep-align/BSNT_04656___mrpE.1.24716.seq
#    -bsequence pep-align/BPUM_2833___mrpE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04656___mrpE-BPUM_2833___mrpE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04656___mrpE-BPUM_2833___mrpE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04656___mrpE
# 2: BPUM_2833___mrpE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 159
# Identity:     108/159 (67.9%)
# Similarity:   135/159 (84.9%)
# Gaps:           1/159 ( 0.6%)
# Score: 558.0
# 
#
#=======================================

BSNT_04656___      1 MAFQILLNVFLAFCWMFLSNSPSAAGFITGYILGMLSLFFFRRFFTRQFY     50
                     ||||||||..|||.|||::::..||.|::|::|||:::|..||||.::||
BPUM_2833___m      1 MAFQILLNALLAFTWMFMNDTYRAADFVSGFVLGMVAIFMLRRFFPQRFY     50

BSNT_04656___     51 LWKLISIIKLCFIFIKELYLANVSVMKSVLSPKLNIRPGIFAFKTELTKD    100
                     .:.|.:|.||..|||:||.|||:||:|:||||||.|:||||||:|:|..|
BPUM_2833___m     51 GYALYAIFKLVLIFIRELLLANLSVLKTVLSPKLTIKPGIFAFRTDLKTD    100

BSNT_04656___    101 WEITLLSLLITLTPGTLVMDISDDRTILYIHAMDIEDAEKAIFDIRESFE    150
                     |||::||.:|||||||||:||||||:||||||||||||||||.|||.|||
BPUM_2833___m    101 WEISILSNMITLTPGTLVIDISDDRSILYIHAMDIEDAEKAIHDIRVSFE    150

BSNT_04656___    151 KAIQEVSR-    158
                     |||||||. 
BPUM_2833___m    151 KAIQEVSGK    159


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