Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04655 and BPUM_2832
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:25
# Commandline: needle
# -asequence pep-align/BSNT_04655___mrpD.1.24716.seq
# -bsequence pep-align/BPUM_2832___mrpD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04655___mrpD-BPUM_2832___mrpD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04655___mrpD-BPUM_2832___mrpD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04655___mrpD
# 2: BPUM_2832___mrpD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 498
# Identity: 370/498 (74.3%)
# Similarity: 433/498 (86.9%)
# Gaps: 5/498 ( 1.0%)
# Score: 1893.5
#
#
#=======================================
BSNT_04655___ 1 MINMNNFVILPILIPLLSAILLIFMTKNLMLMRIFSTAASAIGIVISGIL 50
||:|||.||||||||||:|.|||||.||::|.|.||..||...||.:..|
BPUM_2832___m 1 MISMNNLVILPILIPLLAATLLIFMNKNILLSRGFSVFASLSAIVCNVYL 50
BSNT_04655___ 51 VQTVFTKGIQTLSLGGWKAPYGIVLAADQFASLLVLTTAIIGLLVGLYSF 100
|||:||.|||||.|||||||:||.|.|||||:|||||.:::||:..|:||
BPUM_2832___m 51 VQTIFTSGIQTLYLGGWKAPFGIALVADQFAALLVLTASVVGLVTVLFSF 100
BSNT_04655___ 101 RSVGEKRERSFYYSGVQFLLAGVSGAFLTGDLFNMYVFFELLLIASYMLI 150
:::|:::||.|||||||||||||||||||||:||::|||||||:||||||
BPUM_2832___m 101 QTIGKEKERLFYYSGVQFLLAGVSGAFLTGDIFNLFVFFELLLMASYMLI 150
BSNT_04655___ 151 VLGGTKIQLLESLKYIVFNIVSSALFVIGVGFLYAVTGTLNMADLSVKIS 200
||||:|.||.||||||||||:|||||::||..|||||||||||||||||:
BPUM_2832___m 151 VLGGSKPQLRESLKYIVFNIISSALFIVGVACLYAVTGTLNMADLSVKIA 200
BSNT_04655___ 201 ETGQTGLITVIGVLMLLVFGMKGGIFPLYFWLPGSYYAPPAAISALFGAL 250
|:|||||||||.:|.::|||:|.|||||||||||||:|||||||||||||
BPUM_2832___m 201 ESGQTGLITVISILFMIVFGLKAGIFPLYFWLPGSYHAPPAAISALFGAL 250
BSNT_04655___ 251 LTKVGLYSIARVFTLIFIHDTAFTHQLMIWLAALTVIFGVIGSLAYSNVM 300
|||||||:|||||||||||||.|||.||.||||||||||||||||||:|.
BPUM_2832___m 251 LTKVGLYAIARVFTLIFIHDTGFTHTLMAWLAALTVIFGVIGSLAYSDVQ 300
BSNT_04655___ 301 KIVIYNIITAVGVILFGVAVHTPASIQGAIYYLIHDMLIKGALFMLAGTL 350
|||||||:|||||||||:|.:||||:|||||||||||:||||||||||.|
BPUM_2832___m 301 KIVIYNIVTAVGVILFGIAANTPASLQGAIYYLIHDMVIKGALFMLAGAL 350
BSNT_04655___ 351 IALTGTANLHKMGGLIKRYPVLGWMFFISAISLAGIPPLSGFVGKFKIAE 400
....||.:|.||||||:..|:|||||||||:||||||||||||||.||.|
BPUM_2832___m 351 FVYAGTNHLKKMGGLIQSKPLLGWMFFISALSLAGIPPLSGFVGKLKIVE 400
BSNT_04655___ 401 GGFAEGEFTISMLILLSSLLVLYSVLRIFIHAFWGEEKET--PKPNHRTA 448
|||:.|..|.|:|:||||||||||::|||..||||||::| .|| :.
BPUM_2832___m 401 GGFSAGYMTFSILVLLSSLLVLYSIMRIFTLAFWGEEQDTRRRKP---SI 447
BSNT_04655___ 449 KGLLYPAAIFLLLSLLFGLGTEWVSPYVDQAAETLLNPEKYIEAVLKE 496
||::||..:.::|||..|||||::|||::||||.|..|||||:|||||
BPUM_2832___m 448 KGMVYPGVMLVILSLAIGLGTEFISPYINQAAEMLSTPEKYIQAVLKE 495
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