Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04646 and BPUM_2824

See DNA alignment / Visit BSNT_04646 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:23
# Commandline: needle
#    -asequence pep-align/BSNT_04646___yufO.1.24716.seq
#    -bsequence pep-align/BPUM_2824.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04646___yufO-BPUM_2824.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04646___yufO-BPUM_2824.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04646___yufO
# 2: BPUM_2824
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 511
# Identity:     410/511 (80.2%)
# Similarity:   466/511 (91.2%)
# Gaps:           1/511 ( 0.2%)
# Score: 2105.0
# 
#
#=======================================

BSNT_04646___      1 MEYVIEMLNIRKAFPGIVANDNINLQVKKGEIHALLGENGAGKSTLMNVL     50
                     |:||||||||||.||||||||||.||:|||||||||||||||||||||||
BPUM_2824          1 MDYVIEMLNIRKEFPGIVANDNITLQLKKGEIHALLGENGAGKSTLMNVL     50

BSNT_04646___     51 FGLYQPERGEIRVRGEKVHINSPNKANDLGIGMVHQHFMLVDTFTVAENI    100
                     |||||||:|||:|.|:.|.|:|||.|:|||||||||||||||||||||||
BPUM_2824         51 FGLYQPEKGEIKVHGKPVTISSPNDASDLGIGMVHQHFMLVDTFTVAENI    100

BSNT_04646___    101 ILGKEPKKFGRIDRKRAGQEVQDISDRYGLQIHPEAKAADISVGMQQRAE    150
                     ||||||||||:||:::|.|:||::||||||:|.|.||.:|||||||||||
BPUM_2824        101 ILGKEPKKFGKIDKEQAIQQVQELSDRYGLKIDPAAKVSDISVGMQQRAE    150

BSNT_04646___    151 ILKTLYRGADILIFDEPTAVLTPHEIKELMQIMKNLVKEGKSIILITHKL    200
                     |||||||||||||||||||||||.|||||:||||||:.||||||||||||
BPUM_2824        151 ILKTLYRGADILIFDEPTAVLTPQEIKELIQIMKNLINEGKSIILITHKL    200

BSNT_04646___    201 KEIMEICDRVTVIRKGKGIKTLDVRDTNQDELASLMVGREVSFKTEKRAA    250
                     ||||:.|.|||:||||:||:||||..||:||||||||||||||||:|:.|
BPUM_2824        201 KEIMDACHRVTIIRKGQGIRTLDVESTNKDELASLMVGREVSFKTDKKEA    250

BSNT_04646___    251 QPGAEVLAIDGITVKDTRGIETVRDLSLSVKAGEIVGLAGVDGNGQSELI    300
                     .|..|||.|..:||||.||||.|:.|:||||||||||:||||||||||||
BPUM_2824        251 APAEEVLHIQDLTVKDARGIEAVKHLNLSVKAGEIVGIAGVDGNGQSELI    300

BSNT_04646___    301 EAVTGLRKTDSGTITLNGKQIQNLTPRKITESGIGHIPQDRHKHGLVLDF    350
                     ||:|||:|:::|||.||||.||||.|||:|||||||||||||||||||||
BPUM_2824        301 EAITGLKKSEAGTIMLNGKAIQNLPPRKVTESGIGHIPQDRHKHGLVLDF    350

BSNT_04646___    351 PIGENILLQSYYKKPYSALGVLHKGEMYKKARSLISEYDVRTPDEYTHAR    400
                     .|||||.||:||::|||..|:::...:|:||:.:|:|||||||.|||.||
BPUM_2824        351 SIGENISLQTYYQRPYSKFGLMNMKNIYQKAKRIIAEYDVRTPSEYTEAR    400

BSNT_04646___    401 ALSGGNQQKAIIGREIDRNPDLLIAAQPTRGLDVGAIEFVHKKLIEQRDA    450
                     |||||||||||||||:||||||||||||||||||||||||||:||||||.
BPUM_2824        401 ALSGGNQQKAIIGREVDRNPDLLIAAQPTRGLDVGAIEFVHKRLIEQRDT    450

BSNT_04646___    451 GKAVLLLSFELEEIMNLSDRIAVIFEGRIIASVNPQETTEQELGLLMAGS    500
                     ||||||:||||:||:|:||:|||||||.|||.|:|:||||||||||||||
BPUM_2824        451 GKAVLLISFELDEIINVSDKIAVIFEGSIIAIVDPKETTEQELGLLMAGS    500

BSNT_04646___    501 TQKEAGK-ANG    510
                     ||:|.|| ||.
BPUM_2824        501 TQQEVGKEANV    511


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.