Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04646 and BPUM_2824
See
Amino acid alignment /
Visit
BSNT_04646 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:23
# Commandline: needle
# -asequence dna-align/BSNT_04646___yufO.1.24716.seq
# -bsequence dna-align/BPUM_2824.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04646___yufO-BPUM_2824.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04646___yufO-BPUM_2824.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04646___yufO
# 2: BPUM_2824
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1567
# Identity: 1138/1567 (72.6%)
# Similarity: 1138/1567 (72.6%)
# Gaps: 65/1567 ( 4.1%)
# Score: 3983.0
#
#
#=======================================
BSNT_04646___ 1 ATGGAATATGTCATTGAAATGCTCAATATCCGCAAGGCGTTTCCAGGTAT 50
.||||.|||||||||||||||.|.|||||.|||||.|..||.||.||.||
BPUM_2824 1 GTGGATTATGTCATTGAAATGTTGAATATACGCAAAGAATTCCCTGGCAT 50
BSNT_04646___ 51 CGTCGCCAATGACAATATCAATCTTCAAGTCAAAAAAGGCGAAATACACG 100
.||.||.||.|||||.||.|..||.||..|.|||||.||||||||.||.|
BPUM_2824 51 TGTAGCAAACGACAACATTACGCTGCAGCTAAAAAAGGGCGAAATTCATG 100
BSNT_04646___ 101 CGTTGCTCGGTGAAAACGGAGCGGGGAAATCAACGTTGATGAATGTCCTT 150
||.||||.|||||||||||.||.||.|||||||||.|.|||||.||.|||
BPUM_2824 101 CGCTGCTTGGTGAAAACGGCGCTGGAAAATCAACGCTCATGAACGTGCTT 150
BSNT_04646___ 151 TTCGGGCTGTATCAGCCGGAGCGGGGTGAAATTCGGGTGCGCGGCGAGAA 200
|||||.||.||.|||||.||....||||||||...|||.|..| ||.||
BPUM_2824 151 TTCGGTCTTTACCAGCCTGAAAAAGGTGAAATCAAGGTTCATG--GAAAA 198
BSNT_04646___ 201 --GGTGCACATCAACAGCCCGAACAAAGCGAATGACCTTGGAATTGGAAT 248
.|||..||||...||||||||..|.||.|.|||..|.||.||.||.||
BPUM_2824 199 CCTGTGACCATCTCTAGCCCGAATGATGCAAGTGATTTAGGCATCGGTAT 248
BSNT_04646___ 249 GGTGCACCAGCACTTTATGCTTGTTGACACCTTTACAGTTGCTGAAAATA 298
||||||.||.||||||||||||||.||.|||||.||.||.||||||||.|
BPUM_2824 249 GGTGCATCAACACTTTATGCTTGTCGATACCTTCACCGTCGCTGAAAACA 298
BSNT_04646___ 299 TTATTCTCGGGAAGGAGCCAAAGAAGTTTGGCAGAATTGAC-CGGAAGCG 347
|.|||.|.||.||.|||||.|||||.|||||.|..||.||| ..|||
BPUM_2824 299 TCATTTTAGGAAAAGAGCCCAAGAAATTTGGAAAGATCGACAAAGAA--- 345
BSNT_04646___ 348 TGCTGGCCA---AG-AGGTGCAGGACATTTCCGATCGATACGGCCTGCAG 393
|..|||| || |.||.||.||..||||.||.||.||.|||.|..|.
BPUM_2824 346 --CAAGCCATACAGCAAGTACAAGAGCTTTCTGACCGCTATGGCTTAAAA 393
BSNT_04646___ 394 ATCCATCCTGAAGCAAAAGCAGCTGACATATCAGTCGGTATGCAGCAGCG 443
||..|.||||..|||||||.|.|||||||.|||||.||||||||||||||
BPUM_2824 394 ATAGACCCTGCCGCAAAAGTATCTGACATCTCAGTTGGTATGCAGCAGCG 443
BSNT_04646___ 444 CGCAGAAATATTAAAAACCCTCTACCGCGGTGCCGACATTCTGATTTTTG 493
.||||||||.||||||||.||.||.|||||.||.||.|||.||||.||.|
BPUM_2824 444 TGCAGAAATTTTAAAAACACTTTATCGCGGCGCTGATATTTTGATCTTCG 493
BSNT_04646___ 494 ATGAACCGACGGCTGTTTTGACGCCTCATGAAATTAAGGAACTGATGCAA 543
|.|||||.||.||.||.||.||.|||||.||||||||.|||||.||.|||
BPUM_2824 494 ACGAACCAACAGCCGTCTTAACACCTCAAGAAATTAAAGAACTCATACAA 543
BSNT_04646___ 544 ATTATGAAGAACCTGGTCAAAGAAGGGAAGTCCATCATCTTAATCACCCA 593
||||||||.|||.|..||||.|||||.||.|||||.||.|||||.||.||
BPUM_2824 544 ATTATGAAAAACTTAATCAATGAAGGCAAATCCATTATTTTAATTACGCA 593
BSNT_04646___ 594 TAAGCTGAAAGAGATTATGGAGATTTGTGACCGCGTTACGGTTATCCGTA 643
|||.||||||||.||||||||...||||.|||||||.||..||||.||.|
BPUM_2824 594 TAAACTGAAAGAAATTATGGATGCTTGTCACCGCGTCACCATTATTCGAA 643
BSNT_04646___ 644 AAGGAAAAGGCATCAAAACCCTTGATGTCCGTGA---TACAAACCAAGAC 690
||||..|||||||....||.||||||||| || .||||||.||||.
BPUM_2824 644 AAGGCCAAGGCATTCGCACACTTGATGTC---GAAAGCACAAACAAAGAT 690
BSNT_04646___ 691 GAACTCGCCAGTCTAATGGTCGGCCGCGAGGTATCGTTCAAAACTG---- 736
||.||.||.||.||.||||||||.||.||.||.||.||.||.||.|
BPUM_2824 691 GAGCTTGCAAGCCTCATGGTCGGTCGTGAAGTTTCATTTAAGACAGACAA 740
BSNT_04646___ 737 AAAAGAGAGCTGCTCAGCCGGGAGCGGAAGTGCTTGCGATTGACGGCATA 786
|||||| |||.||| ||.|..|.||||||.|||...|||.|.|...|.
BPUM_2824 741 AAAAGA-AGCCGCT---CCTGCTGAGGAAGTACTTCACATTCAAGATCTT 786
BSNT_04646___ 787 ACTGTAAAGGATACCCGCGGAATAGAGACAGTCAGAGATTTGTCTCTTTC 836
||.|||||.||..|.||.||.||.||..|.||.|.|.||.|...|||.||
BPUM_2824 787 ACGGTAAAAGACGCGCGAGGTATTGAAGCGGTGAAACATCTCAATCTCTC 836
BSNT_04646___ 837 TGTCAAAGCGGGAGAAATAGTCGGCTTAGCAGGCGTCGACGGAAACGGGC 886
.||.||.||.||||||||||||||..|.||.||.|||||.||.||.||.|
BPUM_2824 837 AGTAAAGGCTGGAGAAATAGTCGGTATCGCTGGAGTCGATGGCAATGGTC 886
BSNT_04646___ 887 AATCAGAGCTGATCGAAGCGGTGACAGGACTCCGCAAAA----CAGATTC 932
||||.||..|.||.|||||..|.||.||..| |||| ||||..|
BPUM_2824 887 AATCTGAATTAATTGAAGCCATTACTGGTTT----AAAAAAGTCAGAGGC 932
BSNT_04646___ 933 AGGAACAATCACCTTAAACGGAAAACAGATCCAAAACCTGACGCCAAGAA 982
.||.||.||||...|||||||.|||...||.|||||.||..||||..|.|
BPUM_2824 933 TGGCACGATCATGCTAAACGGGAAAGCCATTCAAAATCTTCCGCCTCGTA 982
BSNT_04646___ 983 AAATCACTGAATCCGGGATCGGGCATATTCCTCAGGATCGCCATAAACAC 1032
|..|.||.|||||.||.||.||.|||||||||||.||.||.|||||||||
BPUM_2824 983 AGGTGACCGAATCTGGAATTGGACATATTCCTCAAGACCGTCATAAACAC 1032
BSNT_04646___ 1033 GGTCTCGTCCTTGATTTTCCAATCGGAGAGAATA--TCCTGCTGCAAAGC 1080
||.||.||.|||||||||.||||.|||||.|||| |||| |.||||..
BPUM_2824 1033 GGACTAGTGCTTGATTTTTCAATAGGAGAAAATATTTCCT--TACAAACG 1080
BSNT_04646___ 1081 TATTA-CAAAAAG---CCGTATTCAGCATTGGGCGTTTTACATAAAGGCG 1126
||||| | || ||.||.|||..|||.|| ||..||.||...|
BPUM_2824 1081 TATTATC----AGCGTCCATACTCAAAATTCGG----TTTGATGAATATG 1122
BSNT_04646___ 1127 AA----ATGTACAAAAAAGCACGCAGCCTGATCA---GCGAGTACGACGT 1169
|| ||.|||.||||.||| |..|.||||| .||||||.||.||
BPUM_2824 1123 AAAAATATTTACCAAAAGGCA---AAGCGGATCATTGCCGAGTATGATGT 1169
BSNT_04646___ 1170 CAGAACGCCGGATGAATATACACACGCTCGGGCATTGTCAGGCGGAAACC 1219
||||||.|||..||||||||||.|.||.||.||..|.||||||||.||.|
BPUM_2824 1170 CAGAACACCGAGTGAATATACAGAGGCGCGCGCCCTATCAGGCGGGAATC 1219
BSNT_04646___ 1220 AGCAAAAAGCGATTATCGGGCGGGAAATAGACCGAAATCCTGATTTATTA 1269
||||||||||.|||||.||.||.|||.|.|||||.|||||||||||||||
BPUM_2824 1220 AGCAAAAAGCCATTATTGGCCGTGAAGTTGACCGCAATCCTGATTTATTA 1269
BSNT_04646___ 1270 ATTGCCGCCCAGCCGACTCGCGGCCTTGATGTCGGAGCGATTGAATTTGT 1319
||||||||.||||||||.||.||.||||||||.||.||||||||||||||
BPUM_2824 1270 ATTGCCGCTCAGCCGACACGTGGACTTGATGTTGGTGCGATTGAATTTGT 1319
BSNT_04646___ 1320 CCATAAAAAGCTCATTGAGCAGCGTGATGCCGGGAAAGCCGTTCTTCTCC 1369
||||||....|||||||||||..|.||..|.||.||||||||.||.|||.
BPUM_2824 1320 CCATAAGCGCCTCATTGAGCAAAGAGACACAGGCAAAGCCGTCCTGCTCA 1369
BSNT_04646___ 1370 TCTCGTTTGAGCTTGAAGAAATTATGAATCTCAGTGACAGAATCGCCGTT 1419
||||.|||||||||||.||||||||.|||.|||||||.|.|||.||.|||
BPUM_2824 1370 TCTCATTTGAGCTTGATGAAATTATCAATGTCAGTGATAAAATTGCAGTT 1419
BSNT_04646___ 1420 ATTTTTGAAGGACGCATTATCGCCAGCGTTAATCCGCAGGAAACCACTGA 1469
|||||||||||..|||||||.||||.||||.||||..|.|||||.||.||
BPUM_2824 1420 ATTTTTGAAGGCAGCATTATTGCCATCGTTGATCCAAAAGAAACAACAGA 1469
BSNT_04646___ 1470 ACAGGAGCTTGGTCTCTTGATGGCAGGAAGCACGCAAAAGGAAGCGGGGA 1519
.||.||.||||||||.||.|||||.|||||.||||||.||||||.|||||
BPUM_2824 1470 GCAAGAACTTGGTCTATTAATGGCTGGAAGTACGCAACAGGAAGTGGGGA 1519
BSNT_04646___ 1520 ---AAGCAAATGGTTAA 1533
|||||||||..|||
BPUM_2824 1520 AAGAAGCAAATGTCTAA 1536
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.