Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04642 and BPUM_2820
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:22
# Commandline: needle
# -asequence pep-align/BSNT_04642___dcuS.1.24716.seq
# -bsequence pep-align/BPUM_2820.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04642___dcuS-BPUM_2820.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04642___dcuS-BPUM_2820.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04642___dcuS
# 2: BPUM_2820
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 533
# Identity: 374/533 (70.2%)
# Similarity: 447/533 (83.9%)
# Gaps: 0/533 ( 0.0%)
# Score: 1909.0
#
#
#=======================================
BSNT_04642___ 1 MKKTLKLQTRLTIFVCIVVLIALLITFFTVGAQTTKRIRDQEKATALQTA 50
|||||:|||||||||||||||:|.|||||:.::|.|.|..||:..||.||
BPUM_2820 1 MKKTLRLQTRLTIFVCIVVLISLCITFFTIWSETAKNIHQQERDIALSTA 50
BSNT_04642___ 51 EMVAEAPMTAAALESGKKQKELQSYTKRVQKITGTEFVVVMDMNGIRKTH 100
:||||||:||.:|:..:....|:.||..||:||.||||||||||||||||
BPUM_2820 51 KMVAEAPITAKSLKENQSYSALRQYTTSVQRITKTEFVVVMDMNGIRKTH 100
BSNT_04642___ 101 PDPSKIGKKFRGGDESEVLKGHVHISTASGTLGKSQRAFVPVYAENGKQV 150
|:|.||||:|.||||...|:|..||||||||||:|.|||||||.::|||:
BPUM_2820 101 PNPQKIGKRFAGGDEEPALQGKEHISTASGTLGRSMRAFVPVYDQDGKQL 150
BSNT_04642___ 151 GAVAVGITVNEIDEVISHSLRPLYFIICVSIFVGVIGAVIVARTVKNIMY 200
||||||||:.|||.:|..||.||||:..:|:..|:|||:||||.||.||:
BPUM_2820 151 GAVAVGITLKEIDLIIHQSLLPLYFVTSLSLLSGIIGALIVARKVKKIMF 200
BSNT_04642___ 201 GLEPYEIATLLEERSAMLESTKEGILAVDEHGKIKLANAEAKHLFVKMGI 250
||||.||||||:|||||||||||||||||:||||||||||||.||..|||
BPUM_2820 201 GLEPDEIATLLKERSAMLESTKEGILAVDQHGKIKLANAEAKRLFHNMGI 250
BSNT_04642___ 251 NTNPIDQDVDDILPKSRLKKVIETKKPLQDRDVRINGLELVFNEVPIQLK 300
..:|.:|||..:||.|.||:||:|:|||.|||||:||||||||||||.:|
BPUM_2820 251 MVDPREQDVQALLPSSGLKQVIDTRKPLLDRDVRMNGLELVFNEVPITVK 300
BSNT_04642___ 301 GQTVGAIATFRDKTEVKHLAEQLSGVKMYANALRAQSHEFMNKLHVILGL 350
|:.|||||||||||||||||||||||||||||||||||||||||||||||
BPUM_2820 301 GEIVGAIATFRDKTEVKHLAEQLSGVKMYANALRAQSHEFMNKLHVILGL 350
BSNT_04642___ 351 VQLKEYDDLGDYIKDIAIQQKSETSEIINDVKSSVLAGFLLGKQSFIREQ 400
||||.|||||.|||||||.|::||:||||.||:||||||||||||:||||
BPUM_2820 351 VQLKNYDDLGTYIKDIAIYQQTETNEIINHVKNSVLAGFLLGKQSYIREQ 400
BSNT_04642___ 401 GANLDIECNGVIPNAADPSVIHELITIIGNLINNGLDAVADMPKKQITMS 450
||.|::.|:..:||:.||:|.|:|||:||||:||.||||:....|.|::|
BPUM_2820 401 GATLEVICSTQVPNSEDPAVTHDLITVIGNLLNNALDAVSQTETKNISIS 450
BSNT_04642___ 451 MRFHNSILDIEITDTGAGMSEEDQAKVFEQGYSTKGKNRGFGLYFTQQSI 500
.|:....|.|||||||.|:::|:|..:|:||:||||::|||||||..|||
BPUM_2820 451 FRYVQEQLHIEITDTGVGLTKEEQEIMFDQGFSTKGQDRGFGLYFVDQSI 500
BSNT_04642___ 501 ENLKGQMILTSEKNEGTTFSIRIPYEPKEENHD 533
:.|.|.:|:||||.||||||:||||:.||::||
BPUM_2820 501 KKLNGHLIVTSEKGEGTTFSLRIPYKQKEDSHD 533
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