Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04638 and BPUM_2816
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:21
# Commandline: needle
# -asequence pep-align/BSNT_04638.1.24716.seq
# -bsequence pep-align/BPUM_2816.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04638-BPUM_2816.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04638-BPUM_2816.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04638
# 2: BPUM_2816
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 398
# Identity: 225/398 (56.5%)
# Similarity: 284/398 (71.4%)
# Gaps: 49/398 (12.3%)
# Score: 1210.0
#
#
#=======================================
BSNT_04638 1 --------------------------------------------MFGITF 6
:||:||
BPUM_2816 1 MYIMWFVNFFVSASITMIVPFLSLYIESLDSSYSNEFVQRWSGYVFGVTF 50
BSNT_04638 7 LMAFLVSPFWGRFGDKRGYKKILMATGTGIALSIFFMGFVTSVYQLFFLR 56
|.|||:||.|||.||:.||||||:..|.|||.||..||.|.:|||||.||
BPUM_2816 51 LTAFLISPIWGRIGDRHGYKKILLINGIGIATSILLMGLVQTVYQLFALR 100
BSNT_04638 57 MAMGLVTGFIPTSLAMISAQTPKSSAGKTLGTLQMGQVSGSLFGPLLGGM 106
:.||||||||.||:|:|||||.|::|||||||:||..|:|.|||||:||.
BPUM_2816 101 LFMGLVTGFISTSMALISAQTKKATAGKTLGTMQMSNVAGGLFGPLMGGF 150
BSNT_04638 107 LADRFGFTYTFFITSFVIFSSVLLVLFGVKEKPLAEKTAKRTSYSRKEVL 156
:||..||.||||:|:.||::|.::::|||||:|:..|.|||.||||||||
BPUM_2816 151 MADSVGFIYTFFLTAAVIYASAIVIIFGVKEQPIRSKEAKRVSYSRKEVL 200
BSNT_04638 157 SYIFHHPALWVMMLLTMLIQTGNFSIQPLLALYVNELHGPVNLAFFSGMA 206
.:||..|.|.|.||||.:.|.||||||||||||:::|||||||||::|:|
BPUM_2816 201 VHIFKQPLLVVTMLLTFITQVGNFSIQPLLALYIHDLHGPVNLAFYAGLA 250
BSNT_04638 207 FSATGLGSLLLARKWGDLGDRYGHRRILIGLLLAASFFFIPQALASSLSV 256
|||||||:||..|||||||||.||.::|:.||:.:|..|||||:|.|.::
BPUM_2816 251 FSATGLGNLLFTRKWGDLGDRIGHDKVLLALLILSSILFIPQAMADSYAM 300
BSNT_04638 257 LLVFRFLFGMAMGGLLPCITAAIRVQAPGSIQGEVLGYNVSFRFLGNVLG 306
|::||||:|||:||::||.||.||::||.|:|||||||||||||||||:|
BPUM_2816 301 LVLFRFLYGMALGGIIPCTTAYIRIKAPASMQGEVLGYNVSFRFLGNVVG 350
BSNT_04638 307 PLLGGIISSHFTISATFYVTAFLFFAGACMLWIMQKLRKDSYAKAS-- 352
|::|||::||:.|.|.|||||.:|..||..|| .:|..|.||..
BPUM_2816 351 PVIGGIVASHYGIPAVFYVTAGIFLFGALFLW---AVRSQSKAKERSV 395
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