Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04622 and BPUM_2804
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:20
# Commandline: needle
# -asequence pep-align/BSNT_04622___yugJ.1.24716.seq
# -bsequence pep-align/BPUM_2804___yugJ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04622___yugJ-BPUM_2804___yugJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04622___yugJ-BPUM_2804___yugJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04622___yugJ
# 2: BPUM_2804___yugJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 387
# Identity: 328/387 (84.8%)
# Similarity: 354/387 (91.5%)
# Gaps: 0/387 ( 0.0%)
# Score: 1772.0
#
#
#=======================================
BSNT_04622___ 1 MQNFTYWNPTKLIFGRGEVERLPEELKPYGKNVLLVYGGGSIKRSGLYDQ 50
|..|||||||||:||:|||..|.:|||.||||||||||||||||:|||||
BPUM_2804___y 1 MDRFTYWNPTKLMFGKGEVSALSDELKHYGKNVLLVYGGGSIKRNGLYDQ 50
BSNT_04622___ 51 VIEQLNKAGATVHELAGVEPNPRVSTVNKGVAICKEQNIDFLLAVGGGSV 100
|:..|.::|||:.||||||||||::||.|||.:|||.|:||:||||||||
BPUM_2804___y 51 VVSILKESGATITELAGVEPNPRLTTVRKGVELCKENNVDFILAVGGGSV 100
BSNT_04622___ 101 IDCTKAIAAGAKYDGDAWDIVTKKHQPKDALPFGTVLTLAATGSEMNSGS 150
||.|||||||||||||||||||:||.|.:|:|||||||||||||||||||
BPUM_2804___y 101 IDATKAIAAGAKYDGDAWDIVTRKHVPMEAIPFGTVLTLAATGSEMNSGS 150
BSNT_04622___ 151 VITNWETKEKYGWGSPLVFPKFSILDPVNTFTVPKNHTIYGMVDMMSHVF 200
|||||||.||||||||.|||||||||||||||||||||||||||||||||
BPUM_2804___y 151 VITNWETNEKYGWGSPAVFPKFSILDPVNTFTVPKNHTIYGMVDMMSHVF 200
BSNT_04622___ 201 EQYFHHVSNTPYQDRMCESLLRTVIETAPKLINDLENYELRETILYTGTI 250
||||||..||||||||||.|||||||||||||.||||||||||||:||||
BPUM_2804___y 201 EQYFHHTENTPYQDRMCEGLLRTVIETAPKLIGDLENYELRETILFTGTI 250
BSNT_04622___ 251 ALNGMLSMGARGDWATHNIEHAVSAVYDIPHAGGLAILFPNWMRHTLSEN 300
|||||||||||||||:|||||||||||||||||||||||||||:|.:.||
BPUM_2804___y 251 ALNGMLSMGARGDWASHNIEHAVSAVYDIPHAGGLAILFPNWMKHVIQEN 300
BSNT_04622___ 301 PARMKQLAVRVFDVEEAGKTDEEIALEGIDKLSAFWTSLGAPNRLADYDI 350
|.|.||||||||||:.|||||||:.|||||||||||||||||||||||||
BPUM_2804___y 301 PGRFKQLAVRVFDVDPAGKTDEEVGLEGIDKLSAFWTSLGAPNRLADYDI 350
BSNT_04622___ 351 NDEQLDTIADKAMANGTFGQFKSLNKEDVLSILKASL 387
|||::|.|||:|||.|.|||||.|||||||:||.|||
BPUM_2804___y 351 NDEKIDLIADRAMARGEFGQFKKLNKEDVLAILNASL 387
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