Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04616 and BPUM_2800

See DNA alignment / Visit BSNT_04616 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:20
# Commandline: needle
#    -asequence pep-align/BSNT_04616___yugN.1.24716.seq
#    -bsequence pep-align/BPUM_2800___yugN.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04616___yugN-BPUM_2800___yugN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04616___yugN-BPUM_2800___yugN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04616___yugN
# 2: BPUM_2800___yugN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 134
# Identity:      77/134 (57.5%)
# Similarity:    99/134 (73.9%)
# Gaps:           1/134 ( 0.7%)
# Score: 431.0
# 
#
#=======================================

BSNT_04616___      1 MIPIPSAIDGQSFLLQELEQVMKPLGYVINGGWEYDHGYFDYKIDDRDGY     50
                     ||.:||.:.|:||.|..||:.||||||||||.|:|||||||||||:||||
BPUM_2800___y      1 MIHVPSRLPGESFSLYHLEETMKPLGYVINGNWDYDHGYFDYKIDNRDGY     50

BSNT_04616___     51 LFLRIPVNAVQGSLDERGAAVRIGTPFMLRQVFQADVDDHAEGGPFQSLF    100
                     .|||:|..|.:|.||:.|..|::|.||:|:.|:|..:||||..|...:.|
BPUM_2800___y     51 TFLRVPFTAEKGQLDQPGVVVKLGDPFLLKHVYQDKLDDHAMVGNVGASF    100

BSNT_04616___    101 NQFSEPERRDAEIDPAFLDIGASLVKELEDVLLH    134
                     |||.||:.:|.::..|:.:||.||||||||.|| 
BPUM_2800___y    101 NQFQEPKEKDGDVSKAYTEIGFSLVKELEDALL-    133


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