Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04604 and BPUM_2795

See DNA alignment / Visit BSNT_04604 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:18
# Commandline: needle
#    -asequence pep-align/BSNT_04604___yugU.1.24716.seq
#    -bsequence pep-align/BPUM_2795.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04604___yugU-BPUM_2795.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04604___yugU-BPUM_2795.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04604___yugU
# 2: BPUM_2795
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 134
# Identity:      89/134 (66.4%)
# Similarity:   111/134 (82.8%)
# Gaps:           3/134 ( 2.2%)
# Score: 516.0
# 
#
#=======================================

BSNT_04604___      1 MLKTLQIKTTKRDEMIDITREVEAFLQETGITSGAALIYCPHTTAGITIN     50
                      :|.:.|:|.:||||||:|.||..:::|||..:|:.::||||||||||||
BPUM_2795          1 -MKKINIQTNRRDEMIDVTSEVHQYVKETGSQNGSVIVYCPHTTAGITIN     49

BSNT_04604___     51 ENADPDVKKDMLRRFDEVYPWEHELDRHMEGNTAAHMKSSTVGASQHVIV    100
                     ||||||||:|||||.|||:||||..|||||||||||||:|.:||||||::
BPUM_2795         50 ENADPDVKRDMLRRLDEVFPWEHPKDRHMEGNTAAHMKASYMGASQHVLI     99

BSNT_04604___    101 ENGRLILGTWQGIYFCEFDGPRTRTCYIKMMG--    132
                     .:|.|:||||||||||||||||.|..||::..  
BPUM_2795        100 HHGDLVLGTWQGIYFCEFDGPRHRHFYIQVSSNE    133


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