Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03890 and BPUM_2794

See DNA alignment / Visit BSNT_03890 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:24
# Commandline: needle
#    -asequence pep-align/BSNT_03890___yrpB.1.24716.seq
#    -bsequence pep-align/BPUM_2794.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03890___yrpB-BPUM_2794.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03890___yrpB-BPUM_2794.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03890___yrpB
# 2: BPUM_2794
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 347
# Identity:     167/347 (48.1%)
# Similarity:   225/347 (64.8%)
# Gaps:           4/347 ( 1.2%)
# Score: 840.0
# 
#
#=======================================

BSNT_03890___      1 MNEFMKKFSLTKPIIQAPMAGGITTPRLASAVSNQGALGSLASGYLTPDL     50
                     |.:..|...:...|||||||||..||:|.:|||..|.||||||||:.||.
BPUM_2794          1 MGDITKLLQIKYGIIQAPMAGGAVTPQLVAAVSQCGGLGSLASGYVQPDH     50

BSNT_03890___     51 LEQQIKEMFELTDAPFQINVFVPLGLEMPPEDQIKKWKENIPLANQVNQF    100
                     |.||||::.:||...|.:|||||..:....::.:..|::.:|.....:..
BPUM_2794         51 LRQQIKQVKQLTTRQFHVNVFVPESISEVKKEDVAFWEKKLPARPAADSL    100

BSNT_03890___    101 TSVQEEWDDFYQKIDLILKYKVKACSFTFDLPPEDAVKELKTAGCCLIGT    150
                     .|.:|.|.||.|||:::|:..|...||||..|.|..:..||..|..||||
BPUM_2794        101 PSEKELWHDFEQKINILLEEDVPIVSFTFSCPNEQTIHRLKQKGIFLIGT    150

BSNT_03890___    151 ASTVEEALLMEERGMDIVVLQGSEAGGHRGAFLPSKGESAVGLMALIPQA    200
                     |:|.|||||:||:|||.:||||||||||||.|||:||::.|||.:|....
BPUM_2794        151 ATTKEEALLLEEKGMDAIVLQGSEAGGHRGTFLPAKGDALVGLFSLFSDV    200

BSNT_03890___    201 ADALSVPVIAAGGMIDHRGVKAALTLGAQGVQIGSAFLICHESNAHPVHK    250
                     .....||:|||||:.|..||:.||.|||...|:|:.||...||.|..|:|
BPUM_2794        201 KPICHVPLIAAGGITDRAGVEVALALGADAAQVGTRFLASQESAAADVYK    250

BSNT_03890___    251 QKILEANEADTKLTTLFSGKEARGIVNKWMEEKEQFETQTLPYPYQNTLT    300
                     :.||.|..::||:|.|||||.||||||:||||:.|.|.:.||||.|:..|
BPUM_2794        251 KAILHAESSETKITRLFSGKRARGIVNQWMEEERQNEDRVLPYPVQHVWT    300

BSNT_03890___    301 KAMRQQASLQNNHDQMSLWAGQGIRSLTEEISVKQLLNQLCQEDIKI    347
                     ..||:.|:...|.|||:||||||:..:...::|::::::|...    
BPUM_2794        301 TPMRKAAAAAGNPDQMALWAGQGVGRIHSILTVEEIMHELTHI----    343


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