Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04600 and BPUM_2792

See DNA alignment / Visit BSNT_04600 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:17
# Commandline: needle
#    -asequence pep-align/BSNT_04600___tgl.1.24716.seq
#    -bsequence pep-align/BPUM_2792___tgl.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04600___tgl-BPUM_2792___tgl.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04600___tgl-BPUM_2792___tgl.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04600___tgl
# 2: BPUM_2792___tgl
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity:     127/246 (51.6%)
# Similarity:   176/246 (71.5%)
# Gaps:           1/246 ( 0.4%)
# Score: 680.0
# 
#
#=======================================

BSNT_04600___      1 MIIVSGQLLRPQDIENWQIDQNLNPLLKEMIETPVQFDYHSIAELMFELK     50
                     |||:|||.:..:.:.::|::.....:|.::..:...|.|...::|:||:.
BPUM_2792___t      1 MIILSGQPVTNEQLASFQLEGQKRIILMQLQASNDTFRYRQASDLLFEVT     50

BSNT_04600___     51 LRMNIVAAAKTLHKSGAKFATFLKTYGNTTYWRVSPEGALELKYRMPPSK    100
                     ||.||:.||:.|:||||.||.|.::..|..:||||..|||||:|::.||:
BPUM_2792___t     51 LRSNIMNAARDLNKSGASFAIFQRSRANDAFWRVSEAGALELRYQVEPSR    100

BSNT_04600___    101 AIRDIAENGPFYAFECATAIVIIYYLALIDTIGEDKFNASFDRIILYDWH    150
                     .|:||.|||..|||||||||||::|:.::.|:|::|||.....:.|||||
BPUM_2792___t    101 GIKDIFENGSQYAFECATAIVIVFYMGVLQTVGDEKFNRRLRSLTLYDWH    150

BSNT_04600___    151 YEKLPIYTETGHHFFLGDCLYFKNPEFDPQKAQWRGENVILLGEDKYFAH    200
                     |:.|.||||.|:.|..||||||:||||..|::||||||||.||||:|:.|
BPUM_2792___t    151 YDTLSIYTERGNDFIYGDCLYFENPEFSYQQSQWRGENVIYLGEDQYYGH    200

BSNT_04600___    201 GLGILNGKQIIDKLNSFRKKGALQSAYLLSQATRLDVPSLFRIVR-    245
                     |||||...:||||||..|:.||:||||||.|.||:||..|.::.. 
BPUM_2792___t    201 GLGILTAAEIIDKLNKRRRPGAVQSAYLLPQTTRMDVIYLRQMFGS    246


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