Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04582 and BPUM_2783
See
DNA alignment /
Visit
BSNT_04582 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:12
# Commandline: needle
# -asequence pep-align/BSNT_04582___yubA.1.24716.seq
# -bsequence pep-align/BPUM_2783___yubA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04582___yubA-BPUM_2783___yubA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04582___yubA-BPUM_2783___yubA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04582___yubA
# 2: BPUM_2783___yubA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 388
# Identity: 293/388 (75.5%)
# Similarity: 340/388 (87.6%)
# Gaps: 8/388 ( 2.1%)
# Score: 1529.0
#
#
#=======================================
BSNT_04582___ 1 METLQTWSGRFKRFFLDNKFVLFLLVLLLIGLNILVFTKTSFIFTPIIVL 50
|.::|.||.||::||||||||||||||||||||||||.||||||||:|||
BPUM_2783___y 1 MNSMQMWSSRFRKFFLDNKFVLFLLVLLLIGLNILVFMKTSFIFTPLIVL 50
BSNT_04582___ 51 LKTISLPIILTGIVFYLLNPVVDFLERRRIRRIYSILLLYLLVIGLITIT 100
:|||:|||||||:|:|||||:|:.|||.|::||:||||||:::||:||:|
BPUM_2783___y 51 VKTIALPIILTGVVYYLLNPIVNLLERFRVKRIFSILLLYIVIIGMITVT 100
BSNT_04582___ 101 IVSIIPFLKEQIMSLIDNIPRYVDIVENQTKQLIGSNFVNQAQQTTNINI 150
||||||||:.|:|||..|:|:|||.||:|.:||.||||:.|||:..|.|:
BPUM_2783___y 101 IVSIIPFLQAQMMSLFHNLPKYVDTVEDQIRQLTGSNFITQAQKNMNFNV 150
BSNT_04582___ 151 SDLATKVSDQAATIVNSTFTGVGNFIGALTEIIISIVTVPFILFYLLKDG 200
|:|.:|.|.||..|:.|||||||.|:||||||||||||||||||||||||
BPUM_2783___y 151 SELVSKASSQATKILESTFTGVGTFLGALTEIIISIVTVPFILFYLLKDG 200
BSNT_04582___ 201 KKLPVYILKFVPTQLKEQTYTVLSEMNHRLSSYIRGQIIVSFCIGFLLFI 250
||||.|.|||:|.:.:|.|:.||.||||||||||.||||||||||.||.|
BPUM_2783___y 201 KKLPDYFLKFIPNKFREHTHIVLHEMNHRLSSYILGQIIVSFCIGVLLLI 250
BSNT_04582___ 251 GYLIIGLDYASLLAVIAACTSIVPYLGPTIAITPAIIIAIVTSPLMLLKL 300
||||||||||.|||:||||||:||||||||||||||:||:||||:|||||
BPUM_2783___y 251 GYLIIGLDYALLLAIIAACTSVVPYLGPTIAITPAIVIALVTSPVMLLKL 300
BSNT_04582___ 301 VIVWTIVQLIEGKLISPQIMGKNLHIHPITIIFLLLTAGKLFGVVGIILA 350
:||||:|||||||.||||:||||||||||||||:||||||||.|||||:|
BPUM_2783___y 301 IIVWTVVQLIEGKFISPQVMGKNLHIHPITIIFVLLTAGKLFSVVGIIVA 350
BSNT_04582___ 351 IPGYAVAKVITTHLFDWFKMRSHLYDEEKNENTPGHKV 388
||.|||.|||||||||||||||:||.|||.
BPUM_2783___y 351 IPTYAVLKVITTHLFDWFKMRSNLYKEEKV-------- 380
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.