Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04398 and BPUM_2779

See DNA alignment / Visit BSNT_04398 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:57
# Commandline: needle
#    -asequence pep-align/BSNT_04398___bioB.1.24716.seq
#    -bsequence pep-align/BPUM_2779___bioB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04398___bioB-BPUM_2779___bioB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04398___bioB-BPUM_2779___bioB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04398___bioB
# 2: BPUM_2779___bioB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 340
# Identity:     193/340 (56.8%)
# Similarity:   249/340 (73.2%)
# Gaps:          14/340 ( 4.1%)
# Score: 1045.0
# 
#
#=======================================

BSNT_04398___      1 -----MNQWMELADRVLAGAEVTDEEALSILHCPDEDILLLMHGAFHIRK     45
                          ...|..:.::.|....:|.:|.|.||...|.::|.:||.|:.:|.
BPUM_2779___b      1 MGKPITLSWEAITEKALKNERITLQEGLDILEADDRELLSIMHAAYQVRF     50

BSNT_04398___     46 HFYGKKVKLNMIMNAKSGLCPENCGYCSQSAISKAPIESYRMVNKETLLE     95
                     ||:..|||||||.|||||.|||||||||||.||.||:|.|.|::::|::.
BPUM_2779___b     51 HFFQNKVKLNMIFNAKSGYCPENCGYCSQSIISNAPVERYTMLDQKTIVA    100

BSNT_04398___     96 GAKRAHDLNIGTYCIVASGRGPSNREVDQVVDAVQEIKETYGLKVCACLG    145
                     ||:.|.....||||||||||.||:||:|:|..||:||.||..||||||||
BPUM_2779___b    101 GAREALKRKAGTYCIVASGRAPSHRELDEVTAAVKEITETMPLKVCACLG    150

BSNT_04398___    146 LLKPEQAKRLKDAGVDRYNHNLNTSQRNHSNITTSHTYDDRVNTVEIAKE    195
                     ||..::|||||:|||.|||||:||.|.:|.:|||:|||.||::|::..|:
BPUM_2779___b    151 LLNEDKAKRLKEAGVHRYNHNINTHQDHHPHITTTHTYHDRLSTLKKVKQ    200

BSNT_04398___    196 SGLSPCSGAIIGIKETKQDVIDIAKSLKALDADSIPVNFLHAIDGTPLEG    245
                     ||:|||||.|||:.||.|.::::|.:|:|:|||||||||||||:|||||.
BPUM_2779___b    201 SGMSPCSGVIIGMGETNQQIVEMAFALRAIDADSIPVNFLHAIEGTPLEH    250

BSNT_04398___    246 VNELNPLYCLKVLALFRFINPSKEIRISGGREVNLRSLQPLGLYAANSIF    295
                     ....:|:..||||||.||:||:||||:|||||.|||:||||.||||||||
BPUM_2779___b    251 QERTHPIKALKVLALMRFVNPTKEIRVSGGREFNLRTLQPLALYAANSIF    300

BSNT_04398___    296 VGDYLTTAGQEETEDHKMLSDLGFEVESVEEMKASLSAKS    335
                     |||||||.||:...||.::.||||::|....         
BPUM_2779___b    301 VGDYLTTKGQQVQTDHHIIEDLGFDIEECAL---------    331


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