Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02116 and BPUM_2777

See DNA alignment / Visit BSNT_02116 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:33
# Commandline: needle
#    -asequence pep-align/BSNT_02116___xre.1.24716.seq
#    -bsequence pep-align/BPUM_2777___xre.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02116___xre-BPUM_2777___xre.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02116___xre-BPUM_2777___xre.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02116___xre
# 2: BPUM_2777___xre
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 125
# Identity:      50/125 (40.0%)
# Similarity:    80/125 (64.0%)
# Gaps:          12/125 ( 9.6%)
# Score: 237.0
# 
#
#=======================================

BSNT_02116___      1 ---MIGGRLKSLRGKR--TQEEIASHIGV-SRARYSHYENGRSEPDYDTL     44
                        :.|..|..||.|.  ::..:|..:|: :.:.|:::|.|..:||.:.:
BPUM_2777___x      1 MDNLTGKILTELREKHGWSKSTVAKKLGLKAMSTYANWEYGLRKPDGEMI     50

BSNT_02116___     45 QKLADYFQVTTDYLLTGKDKKSDD-DMFSDPDLQLAYRDMQDFSPESKQQ     93
                     .|:|:.:.|:||||||||||...| |:..|||||:|::...|||.|:::|
BPUM_2777___x     51 VKIAELYGVSTDYLLTGKDKGGTDVDLADDPDLQIAFKAASDFSEEARRQ    100

BSNT_02116___     94 AIEFINYLKEKE--KNRKPKNK---    113
                     .|:||:|:||||  |.|:||.:   
BPUM_2777___x    101 TIDFIHYIKEKEKQKGRQPKQRDDD    125


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