Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02126 and BPUM_2772

See DNA alignment / Visit BSNT_02126 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:33
# Commandline: needle
#    -asequence pep-align/BSNT_02126___xpf.1.24716.seq
#    -bsequence pep-align/BPUM_2772___xpf.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02126___xpf-BPUM_2772___xpf.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02126___xpf-BPUM_2772___xpf.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02126___xpf
# 2: BPUM_2772___xpf
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 172
# Identity:      81/172 (47.1%)
# Similarity:   116/172 (67.4%)
# Gaps:           3/172 ( 1.7%)
# Score: 406.5
# 
#
#=======================================

BSNT_02126___      1 MQDLLFEYKRTLKQTRIQYKPLAEADESVLSAEELKDKKIIRNMITDLEY     50
                     |||||.||||.||..|.:|:|..|.::..||.:|..|||||.:|::||||
BPUM_2772___x      1 MQDLLIEYKRALKDARKRYEPFREKEDKQLSDQEKHDKKIIASMVSDLEY     50

BSNT_02126___     51 VTEWLEKGRQPGIRRAIDRRDAYQRLMIKDPRIIESFSS--AMMFEPDGQ     98
                     |.|||:.|||||.||.:|||..|||.::.:|.::|:.|.  .::.|.:.:
BPUM_2772___x     51 VVEWLQIGRQPGARRGLDRRSVYQRTILANPEVLEALSHEYTIIQENERE    100

BSNT_02126___     99 VSEEDRERIREALALLTDREKEMFLLHKVECFSYERIADLLGVKKSTVQT    148
                     .||.|::||.|||::||||||::|.:|..:..|:..||.:|.|||.|||.
BPUM_2772___x    101 FSERDKKRIDEALSVLTDREKDVFFMHTTQGLSFSEIAVMLDVKKGTVQK    150

BSNT_02126___    149 TIKRASLKMQRQQEEMNRSLA-    169
                     .::||..||.::.:|.....| 
BPUM_2772___x    151 HMERARTKMSKKVQERLFEAAE    172


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.