Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02142 and BPUM_2762

See DNA alignment / Visit BSNT_02142 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:34
# Commandline: needle
#    -asequence pep-align/BSNT_02142.1.24716.seq
#    -bsequence pep-align/BPUM_2762.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02142-BPUM_2762.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02142-BPUM_2762.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02142
# 2: BPUM_2762
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 73
# Identity:      33/73 (45.2%)
# Similarity:    47/73 (64.4%)
# Gaps:           4/73 ( 5.5%)
# Score: 141.0
# 
#
#=======================================

BSNT_02142         1 MSKDKQQKKA-VHTKSREALFDTADLIKHAKELFGVKPDILQGALFGVDQ     49
                     |||.|:.:.| |..:.:|..|....|.:|:|:||||||:||:||||.:..
BPUM_2762          1 MSKTKKAEPAQVAGEEKEFGFSFEALKEHSKDLFGVKPEILEGALFYIKH     50

BSNT_02142        50 PRMTKSEANQLIQTFLTKEVMSS     72
                     ..:||:||.:.|..||:|||   
BPUM_2762         51 QPITKTEAKKHIDAFLSKEV---     70


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